Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60788g00001 ATGATGTACTCTCTAGAATGCTTTTCTTTATTTCTAGCCATCTTCTCATTCTTTTCCATCCACATTTGGAGGATCAACCGAAACTTGCCTATTCCAAATTTGCCCTTTCTTGGTATGATACCAGCCATTTTGTTTAATGTCTCCAATATTCATGAATACTTAACTACAGCTTTGAAACATTATGGAGGTACTTTTAAGGTTAGAGGGCCTTTGTTCACAAACCTCAACTTTTTCCTCACTAGTGATCCTATGAATGTGCACCACGTTACTAGTAAGAACTTTGTCAACTATGGCAAAGGTTCTGAGTTCCATGAGATTTTTGAAATTCTTGGGGATGGGATATTTAATTCTGATTCACACAAGTGGAAGTATCAGAGGAACTTATTGCAATCACTATTTAAGCAAAACATCTTTGAAAACTTTGTTAGAAAAGTCACTCATAAGAAACTACAAGGTTACCTACTTCCACTTTTGAATGAAGTTTCAGAATCAAGAACTACCGTGGACTTGCAAGACATCTTTCAAAGATTCACTTTTGATAGTATTTGCTCCATAGTGTTGGCATTTGATCCCAATTGCCTTCCCAACAAGCTCACTCAATTCCCTGAGGTTGCTATAGAAAAAGCTTTCAACAAAATGGAGGATACAATTTTCTATAGGCATCTTGTCCCAAGATGGTTCTGGAAATTGCAGAGATGGCTCCAAATTGGACATGAGAAGGACTCCATTACTTCCCTACAAATTGCCGATAAATTCTTGTATGATTGCATATCATCCAGTCTAGAAATGAAAAGTAGATTCAACAATACCAAAGATGATGAATCAAACTTCGACATGCTTAAAGCTCTTGTGGAGAAAAGTGGAATGGAACAAGTAGATCACAAGTTTCTAAGAGACACTGCAAATAATCTCTTGGCAGCTGGAAGGGACACAATTAGTTCAACTTTATGTTGGTTTTTCTGGCTTGTTTCAACTCACCCTAATGTTGAAACCAAGATCCTTGAAGAAATCAGATTAAAGTTTAAAACAAATGAAGAAAATTGGCTCATTTCAGGGGTGGAAGACCTTGACAAGCTAATTTACTTGCATGGAGCTATATGTGAAGCTCTGAGGCTTTTTCCTCCGGTACCATCATACAAGTTCATGGCTTTTAATGCAGGCCCAAGAAGTTGTTTGGGGAAAAATATAAGCTTTATCCAGTTGAAGATGATTGTCATTGCTTTGCTGTGGAACTTTCACTTCCAAGTGGTGGAAGGGCATTCAGTGTGTCCAAGTGTTTCTATTATTCTGCACATGAAGCACGGGTTGCAAGTCAAGATTACTAAGAGAGGCAATTGA 1338 0.3767 MMYSLECFSLFLAIFSFFSIHIWRINRNLPIPNLPFLGMIPAILFNVSNIHEYLTTALKHYGGTFKVRGPLFTNLNFFLTSDPMNVHHVTSKNFVNYGKGSEFHEIFEILGDGIFNSDSHKWKYQRNLLQSLFKQNIFENFVRKVTHKKLQGYLLPLLNEVSESRTTVDLQDIFQRFTFDSICSIVLAFDPNCLPNKLTQFPEVAIEKAFNKMEDTIFYRHLVPRWFWKLQRWLQIGHEKDSITSLQIADKFLYDCISSSLEMKSRFNNTKDDESNFDMLKALVEKSGMEQVDHKFLRDTANNLLAAGRDTISSTLCWFFWLVSTHPNVETKILEEIRLKFKTNEENWLISGVEDLDKLIYLHGAICEALRLFPPVPSYKFMAFNAGPRSCLGKNISFIQLKMIVIALLWNFHFQVVEGHSVCPSVSIILHMKHGLQVKITKRGN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60788g00001 445 Pfam Cytochrome P450 32 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 Pfam Cytochrome P450 377 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 PRINTS E-class P450 group I signature 381 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 PRINTS E-class P450 group I signature 391 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 Gene3D Cytochrome P450 18 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 PRINTS P450 superfamily signature 382 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 384 393 IPR017972 GO:0005506|GO:0016705
Stsc60788g00001 445 Gene3D Cytochrome P450 378 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60788g00001 445 PANTHER CYTOCHROME P450 378 438 - -
Stsc60788g00001 445 SUPERFAMILY Cytochrome P450 30 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60788g00001 Stsc-Chr60788 4312 5807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60788g00001 366 445 Cytochrome P450 AT2G23180 53.750 3.38e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60788g00001 - - adu:107477109 445.277