Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60786g00003 ATGGAGAACCTGCTCAAGTTCAAGTGCAGCTTTGGCGGCCAAATCAGGGGCCACGAAGGCGACCACTTCTCCTACGATGGCGGCAACCACAAGATGCTCCACGTTCGCGGCGACATAAACTTCGACTGTATGACCGCTGAGCTCTCCAACCTCTTCCCAGGTGCCACCGTAACCTCCTTTAAGTATCTGATCCCCGGTGATACCCTCCTGATCACCGTTGATAACGACAGGGACCTCCGTAACCTTATGCGCGAATACAATCAGCACTGCGGGGGTTCTGCTTCGCCCAGCCCGATGAGGATCTTCCTCGACGCTGCCAATCAAGGCAGCGCGGCCGTTGCTCCTCCGGCGAGTATCCCTGAGAACGCCTCCTCAAACGATGATCGGGGCGTGAAAATGGAGGTAGAGGGTCAGGTTGAGTGGAAGTGGGTGCGCTTTGTGGGTAGCGCATCGTTTTCCTTGCCCGGGCCGTTGACTCTTCTGTCGTTTCTTTTCTTACTTGCTGCTCTGATTCTTCTTCTTCTTTGTATACCAATTGCACTCCTGGTAGTCCAAAACTATTCAATGGCGAAGGCGGTTGCCGAGATTGGGAACTTTGAACTTCATCATGACAACCACAGGCTTATTCAATTAGAGAAGCCTATCATTCAATTACCTGTACCTGGAACACTGGTGGTTCCAGCTAAAGATGATGAGTACACTATTGAAATGGTGTTGCATGATAAAAAGGGTAGCAAAATACATGCTTCTATCCCAAAGGTATTGGTAAAGAAGTTTTGTCCTGTTGCTAACATTTTCCAAAATGGAAATATAGATTGCAAGGAACTCATTGATATAACTATAAGTGCTGAGGTGGTTGGAAACGAGGGAAGACAAATTGTCATTACTTTGGAGGATATGGAACAAGGTGCATGTTCAGAGCAGTTATTATGCATCAAAGCTTCATGTGAACCTCTACATAATGGAAGACATTAA 975 0.4769 MENLLKFKCSFGGQIRGHEGDHFSYDGGNHKMLHVRGDINFDCMTAELSNLFPGATVTSFKYLIPGDTLLITVDNDRDLRNLMREYNQHCGGSASPSPMRIFLDAANQGSAAVAPPASIPENASSNDDRGVKMEVEGQVEWKWVRFVGSASFSLPGPLTLLSFLFLLAALILLLLCIPIALLVVQNYSMAKAVAEIGNFELHHDNHRLIQLEKPIIQLPVPGTLVVPAKDDEYTIEMVLHDKKGSKIHASIPKVLVKKFCPVANIFQNGNIDCKELIDITISAEVVGNEGRQIVITLEDMEQGACSEQLLCIKASCEPLHNGRH 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60786g00003 324 PANTHER OS05G0427100 PROTEIN-RELATED 5 131 - -
Stsc60786g00003 324 SUPERFAMILY CAD & PB1 domains 24 109 - -
Stsc60786g00003 324 SMART PB1_new 4 106 IPR000270 GO:0005515
Stsc60786g00003 324 Pfam PB1 domain 23 104 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60786g00003 Stsc-Chr60786 2406 4734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60786g00003 3 103 MAP Kinase Kinase Kinase AT2G35050 34.862 1.03e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60786g00003 - - ahf:112710177 283.493