Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60785g00005 ATGCACTCTATCAGGAGCCTCATTGCAACGCCACCAGACGAAGGACAACTTATAAATATGCTGGTTAAACTGATAAACGCAAAGAACACCATGGAAATTGGAGTCTACACTGGTTACTCTTTGCTCTCTACTGCCCTTGCTCTTCCACATGATGGAAAGATCTTGGCCATGGATGTGAACTGGGAGTATTATGAACTTGGATTGCCCATAATTGAAAAAGCTGGAGTAGCTCACAAAATTGATTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGACCAATTGTTAATAGATGAAAATAACAAGGGGGCATTTGATTTTGTGTTTGTGGATGCGGATAAGAACAACTACTTGAACTACCATAAGAGAGTGATTGAGCTTGTGAAAGTTGGGGGATTGATTGGCTACGATAACACTCTATGGAGTGGTTCTGTGGCGAGCCCACCTGATGCACCAATGATGGATTACGTCAAGGAGTTTCGCAGTTATCTCGTAGAGCTCAACAAGTACCTCGCCCATGATTCAAGGATTGAGATATGTCAACTCCCTGTTGGTGATGGCATTATGTTCTTTTCTTGTCTAAACAAGAGGGAAAAAAAAAAGCCTAAGCTTAGATGA 615 0.4211 MHSIRSLIATPPDEGQLINMLVKLINAKNTMEIGVYTGYSLLSTALALPHDGKILAMDVNWEYYELGLPIIEKAGVAHKIDFREGPALPLLDQLLIDENNKGAFDFVFVDADKNNYLNYHKRVIELVKVGGLIGYDNTLWSGSVASPPDAPMMDYVKEFRSYLVELNKYLAHDSRIEICQLPVGDGIMFFSCLNKREKKKPKLR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60785g00005 204 Gene3D Vaccinia Virus protein VP39 2 192 IPR029063 -
Stsc60785g00005 204 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 193 IPR002935 GO:0008171
Stsc60785g00005 204 Pfam O-methyltransferase 6 189 IPR002935 GO:0008171
Stsc60785g00005 204 PANTHER O-METHYLTRANSFERASE-RELATED 6 188 - -
Stsc60785g00005 204 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 190 IPR029063 -
Stsc60785g00005 204 CDD AdoMet_MTases 32 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60785g00005 Stsc-Chr60785 30674 33795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60785g00005 6 189 Monolignol Biosynthesis Gene Families AT4G34050 73.913 1.42e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60785g00005 K00588 - gmx:100795858 320.087