Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60785g00004 ATGGCTGAAGAACAGTACCAAGAAATTGGCATCACGGATCTCGCTCATAAGACTCTCCTCCAGAGCGATGCACTCTATCAGTATATACTTGAAACGAGTGTGTTTCCAAGAGAGCATGAATGCCTGAAGGAACTCCGTCAGATAACAGAAAAACACCCTTTGAGCCTCATTGCAACGCCACCAGACGAAGGACAACTTATAAATATGCTGGTTAAACTGATAAACGCAAAGAACACCATGGAAATTGGAGTCTACACTGGTTACTCTTTGCTCTCTACTGCCCTTGCTCTTCCACATGATGGAAAGATCTTGGCCATGGATGTGAACTGGGAGTATTATGAACTTGGATTGCCCATAATTGAAAAAGCTGGAGTAGCTCACAAAATTGATTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGACCAATTGTTAATAGATGAAAATAACAAGGGGGCATTTGATTTTGTGTTTGTGGATGCGGATAAGAACAACTACTTGAACTACCATAAGAGAGTGATTGAGCTTGTGAAAGTTGGGGGATTGATTGGCTACGATAACACTCTATGGAGTGGTTCTGTGGCGAGCCCACCTGATGCACCAATGATGGATTACGTCAAGGAGTTTCGCAGTTATCTCGTAGAGCTCAACAAGTACCTCGCCCATGATTCAAGGATTGAGATATGTCAACTCCCTGTTGGTGATGGCATTACCCTATGCCGCCGCATCATGTGA 732 0.4385 MAEEQYQEIGITDLAHKTLLQSDALYQYILETSVFPREHECLKELRQITEKHPLSLIATPPDEGQLINMLVKLINAKNTMEIGVYTGYSLLSTALALPHDGKILAMDVNWEYYELGLPIIEKAGVAHKIDFREGPALPLLDQLLIDENNKGAFDFVFVDADKNNYLNYHKRVIELVKVGGLIGYDNTLWSGSVASPPDAPMMDYVKEFRSYLVELNKYLAHDSRIEICQLPVGDGITLCRRIM 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60785g00004 243 Pfam O-methyltransferase 32 242 IPR002935 GO:0008171
Stsc60785g00004 243 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 241 IPR029063 -
Stsc60785g00004 243 CDD AdoMet_MTases 81 182 - -
Stsc60785g00004 243 PANTHER O-METHYLTRANSFERASE-RELATED 15 242 - -
Stsc60785g00004 243 Gene3D Vaccinia Virus protein VP39 9 243 IPR029063 -
Stsc60785g00004 243 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 18 242 IPR002935 GO:0008171
Stsc60785g00004 243 FunFam Caffeoyl-CoA O-methyltransferase 1 11 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60785g00004 Stsc-Chr60785 30674 33795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60785g00004 3 242 Monolignol Biosynthesis Gene Families AT4G34050 71.667 8.40e-133 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60785g00004 K00588 - gmx:100795858 406.757