Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60772g00006 ATGGCGATGGCTCAGGGAACGGGAATAGGGCGTAGCAGCAGCATGAACAGCAGCAGTAGCAGCAGGGTCATAGGGGAGTTCATAGTTGGAAGAGAGATTGGTTCCGGTTCGTTCTCGCGGGTTTGGCATGGAAGGCACAAGGTTCATGGCACTGAGGTCGCCATCAAAGAGATCGCAACCCAGCGTCTCAATAACAAGCTTCATGATAGCCTCATGTCCGAGATTTTAATCCTCAAGCAAATTAACCACCCTAACATCATTCGTTTGCACGATATCATTCAGGCTCCTGGTAAGATACATCTTGTGTTAGAGTATTGTAAAGGGGGAGACCTATATTTTTACATTCAACGCCATGGAAGGGTACAGGAGGCAACTGCAAAGCATTTTATGCAGCAGCTGGCTGCTGGTCTACAAGTTCTCCGGGACAATAACGTAATTCATCGAGATCTAAAACCACAGAACCTCCTTCTGTCAAGAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCAGAAACCCTGTGTGGTTCACCACTCTACATGGCTCCAGAAATAATGCAACTGCAGAAGTATGATGCAAAGGCAGATCTATGGAGTGTTGGTGCAATCTTATTTCAGCTTGTAACAGGAAGAACACCTTTTACTGGAAACAATCAAATACAGTTGCTACAGAACATTATGAAATCAACAGAATTGGTATTCCCATCTGATTGCCAAAGTCTCAGTTCTGACTGCAAAGATTTGTGTCAGAAATTGCTACGCCGAAATCCAGTGGAACGTCTTACTTTTGAAGAATTCTTTAACCATCCATTCCTTTCTGAGAAGCAACCAGAACGGAATGAACCGTTAAGGAACAGAAGTTCGTCAAGGCTGGTAGGTGGATTTAGTTCAGCAGAATCCGACCCCTTAAGAAGGACTGAGGAAAATTATCAAGAGGATTGCTTACCGTTCTTTCTAGATGATGATTCTAGTGGTCCTGAGGGGAGTCCTTCCTTTTCAAAGAAGTCCTCAATCAAGTCTACCATTGGATTTGATCTACATACAAAACTAGATAAACCAGAGCCAGCATCTCCTGTTGCTAATAACATAAATTATACCTCCAGATACAGTAGTGTAACACAGAGACCTGAAAGCACTACTAAAAGATTGGACAAGCCTAAAGTATCAGGAAGAAATCTTACTGGTCCTATAGAATCTCTAGAACAAAGATTTGTTGATTCTCATTCAAAAATTACAGATTCCCTAGAGAATATTGATCAAGACTATGTTCTTGTGTCTGGACCCCCTATGGATGTTTCTTCATCTTCAGCGAGTGCTTCAAAGCCAAGCCATTCCCCATTTAGGTCAAGTAGTCTTCCTCAAGAGTCTTCAAAAACAATCACTAGATTAAGTGCTCCAATGCCAATTGTTGGAGTTCCTTCCAGTAGCACATGCCAGATTGGAAGCTCAGAAAGTCAGGACTCTGCTCCTGGGACATCACATGGATCAATGGATACAGGTGATGAGCAGCCGTCAGCTCATTGCATGACAAGGATTAAATCATTGCGACAGTGTGCATCTGCTATCACAGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCCGCTAGAAGCATTCTCTATTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCATATATGCCATACACGAGCTGCCTCGGCCATGGAAGGAAGTCCAAATCAAGAAACTTTAAGATACAGGAGGAGTGCCAGCAAGAAGCATGGTAGTTCTGATTCAGAAGAATGCTTTGATGGAAACACCCAAGGGTCAAAGGATATGCTAGCTCAAATTGAAAGTGAGTTTCTGAAGGAATTTGAGCATGCTGAAGAACTTTCCAAAGCCATTGAACCTGGAAACACAGAGATGCCAGATGCAATGGAGACGATTTTCCAATCTGCCCTTGCTTTTGGGAGACATGGGGGTGTGGAAGAGCTCATGGGAGAAATGGAAAGTGCAGTTGCATTGTATTCGAAGGCAGTCCGCCTGTTACTCTTCCTACTAGTTGAAGCACCATCCTTGATTCTCAATCCTCCATTCTCTCTGACCAACTCGGACCGATACAGGCTTCGAAATTACATTGATATTCTCAATAACAGGCAAGGCTATTCGAGATCGCAGCGCATGACTCTTCTGAAATGTGATGACAGTCAAGGCATCCTAAAGGAAAAGTTTTAG 2238 0.4343 MAMAQGTGIGRSSSMNSSSSSRVIGEFIVGREIGSGSFSRVWHGRHKVHGTEVAIKEIATQRLNNKLHDSLMSEILILKQINHPNIIRLHDIIQAPGKIHLVLEYCKGGDLYFYIQRHGRVQEATAKHFMQQLAAGLQVLRDNNVIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELVFPSDCQSLSSDCKDLCQKLLRRNPVERLTFEEFFNHPFLSEKQPERNEPLRNRSSSRLVGGFSSAESDPLRRTEENYQEDCLPFFLDDDSSGPEGSPSFSKKSSIKSTIGFDLHTKLDKPEPASPVANNINYTSRYSSVTQRPESTTKRLDKPKVSGRNLTGPIESLEQRFVDSHSKITDSLENIDQDYVLVSGPPMDVSSSSASASKPSHSPFRSSSLPQESSKTITRLSAPMPIVGVPSSSTCQIGSSESQDSAPGTSHGSMDTGDEQPSAHCMTRIKSLRQCASAITELVNEKMEAGKPLEAFSIQLVILAIWKQALHICHTRAASAMEGSPNQETLRYRRSASKKHGSSDSEECFDGNTQGSKDMLAQIESEFLKEFEHAEELSKAIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMESAVALYSKAVRLLLFLLVEAPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCDDSQGILKEKF 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 287 348 - -
Stsc60772g00006 745 Gene3D Transferase(Phosphotransferase) domain 1 17 325 - -
Stsc60772g00006 745 FunFam Serine/threonine-protein kinase ATG1 19 325 - -
Stsc60772g00006 745 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 587 601 - -
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 371 389 - -
Stsc60772g00006 745 SMART serkin_6 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60772g00006 745 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 441 470 - -
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 575 609 - -
Stsc60772g00006 745 FunFam Non-specific serine/threonine protein kinase 11 107 - -
Stsc60772g00006 745 CDD STKc_ATG1_ULK_like 33 283 - -
Stsc60772g00006 745 ProSiteProfiles Protein kinase domain profile. 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60772g00006 745 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 13 654 IPR045269 GO:0004674|GO:0006914
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 438 470 - -
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 360 408 - -
Stsc60772g00006 745 SUPERFAMILY Protein kinase-like (PK-like) 23 459 IPR011009 -
Stsc60772g00006 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 483 517 - -
Stsc60772g00006 745 MobiDBLite consensus disorder prediction 483 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60772g00006 Stsc-Chr60772 40437 48777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60772g00006 23 284 CBL-interacting serine-threonine protein kinases AT2G30360 37.313 5.11e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Stsc60772g00006 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60772g00006 K08269 - gmx:100791596 1185.24