Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60772g00001 ATGATGATGGCTTTGTGCCGCATTCACTTCAACCACCTTAATCTCTCTTCCCCTTCCGATTCGGCGCTTATTCCTCACACATGTCACTCTCACCTCTCTCTCACTTCCACCACCTCCTCCTCCTCCTCCTCCTCTTCCTTCTTCACAACTCCAACTAAAAAGATCTCTCTCTCCAGTGCTCAGCGCCGTTCGTGTGTTGCTGTGAGCTCGCACATGACCATGGAACAGAAGCCTGTCTCTGAGAACCGAATGCTCGTGTATGTTCCTCCACACCCTCTGATCAAGCACTGGGTTTCAGTTCTGAGAAATGAGCAAACTCCTTGTCCTATCTTCAGAAATGCAATGGCTGAGTTGGGCAGGCTACTAATGTATGAAGCTTCAAGGGATTGGCTGCCTACTGTGGCTGGGGAGATTCAATCCCCAATGGGTGTTGCTTCAGTGGAGTTCATTGATCCAAGAGAGCCTGTGGCTGTAATTCCAATCTTGAGAGCTGGTCTTGCACTTGCTGAGCATGCGTCATCAATCTTACCTGCAACAAAAACATATCATCTAGGAATAAGCAGAAATGAGGAAACACTTCAGCCAACCATATATCTGAACAAGTTACCCGAAAAGTTTACAGAAGAATCTAAAGTATTAGTGGTAGATCCTATGCTTGCAACAGGTGGTACTATAGTAGCAGCCCTTAATCTATTAAAGGAACGTGGTGTAAGCAACAAGCACATTAAAGTGATATCTGCTGTGGCTGCCCCTCCAGCCCTTCAAAAGCTTAGTGAGCAGTTTCCTGGGCTTCATGTATATACTGGAATAATTGATCCTACAGTTAATGAAAAAGGGTTTATCATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTATGGCACTTAA 888 0.4617 MMMALCRIHFNHLNLSSPSDSALIPHTCHSHLSLTSTTSSSSSSSSFFTTPTKKISLSSAQRRSCVAVSSHMTMEQKPVSENRMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVAGEIQSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGISRNEETLQPTIYLNKLPEKFTEESKVLVVDPMLATGGTIVAALNLLKERGVSNKHIKVISAVAAPPALQKLSEQFPGLHVYTGIIDPTVNEKGFIIPGLGDAGDRSYGT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60772g00001 295 Gene3D - 72 295 IPR029057 -
Stsc60772g00001 295 Pfam Uracil phosphoribosyltransferase 88 295 - -
Stsc60772g00001 295 NCBIfam uracil phosphoribosyltransferase 86 295 IPR005765 GO:0004845|GO:0006223
Stsc60772g00001 295 SUPERFAMILY PRTase-like 86 294 IPR029057 -
Stsc60772g00001 295 CDD PRTases_typeI 151 271 IPR000836 -
Stsc60772g00001 295 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 87 272 - -
Stsc60772g00001 295 FunFam Uracil phosphoribosyltransferase 83 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60772g00001 Stsc-Chr60772 4374 9648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60772g00001 26 295 PRT Gene Family AT3G53900 67.778 7.46e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60772g00001 K00761 - gmx:100797537 458.759