Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60771g00002 ATGGTGCTGAGCAGCGCCAAGGCGTTTTTGTCATTGGTGCTACAAATAGGCCTGATAGGATGGATGAAGCTCTCCTCCGTCCTGGTAGATTTGGCAAGGAAGAAGCCTCTTGATTCTGCCGTGGATTTGAGAGCCATAGCTAAGGCTTGTGAAAATTTTAGTGGCGCAGACCTTGCTGAATTGGTGGATGAAGCAGCTAGAGCTGCTATTGAGGAGATATTGACCGCAGTTGAAGGGGGTTCTGGTGATATTAATACTTGCATGCCAAGACATTTTGATATAGCGCTTAGCAAGGTCTCTTCCTCCGTGTGTCCCGCGGAAAGGCTTAGGTATAAGCTCTTGGCAGATCGCTTTAAAGCATCATGA 366 0.4754 MVLSSAKAFLSLVLQIGLIGWMKLSSVLVDLARKKPLDSAVDLRAIAKACENFSGADLAELVDEAARAAIEEILTAVEGGSGDINTCMPRHFDIALSKVSSSVCPAERLRYKLLADRFKAS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60771g00002 121 Gene3D - 25 121 - -
Stsc60771g00002 121 PANTHER AAA-FAMILY ATPASE 31 120 - -
Stsc60771g00002 121 Pfam AAA+ lid domain 41 78 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60771g00002 Stsc-Chr60771 2366 5797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60771g00002 13 119 Calmodulin-binding Proteins AT3G56690 28.972 6.07e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60771g00002 K14571 - csav:115722372 85.8853