Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60761g00007 ATGGCAGAGTCTTCTCTGAATCTCAAGATTACAGGAAAGAGCCATGTGAAGCCAAAGAAGAACATTGGTAGAAAAGAGTACCAACTTGTGACCTTTGATCTTCCCTACTTAGCATTCTACTACAACCAGAAGCTGCTGTTTTACAAAGGGAGTGACTTTGAAGGAATGGTGGAGAAGGTGAAAGAGGGTCTGAGTGTGGTTCTTGAGGAGTTTCATCAGTTAGCAGGGAAGATAGGGAAAGATGAAGAAGGGGTTTTCAGAGTGGAGTATGATGATGACATGGATGGTGTTGAGGTAACTGAGGCTGTTGCTGAGGATGTTGCTGTTGAAGATCTTGCTGTTGCTGAGAGTAGCAGTTCCTTGTTGGAACTTATTCCTTACAATGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTTGCAATTCAGTTGACCAAATTGAAAGATGGGCTTGCAATGGGCTGTGCCTTCAACCATGCAGTCCTTGATGGGACTTCCACGTGGCAATTCATGAGTTCATGGGCCGAGATCTGCAGCGGCGCACCGTCCACCGTAGCCCCACCCTTCCTTGACCGGACCAAGGCCCGAAATACCCGGGTGAAGCTTGACCTCTCAGTGCCAGAGCCCAATGGGCCTACATCTGAGAACGAAGAAAAGCCCAAGCCCAAACTAAGGGAAAAGATCTTCAAATTCTCCGAGTCAGCCATTGACAAGATAAAGTCAACGATCAACGAAAACCCACCATCTGACGGCTCAAAGCCATTCTCAACATTCCAGGCCCTCTCGGCCCATGTTTGGCGCCACATAACCCATGCACGTAACCTAAAGCCCGAAGACTACACAGTCTTCACCGTATTTGTAGATTGTAGAAAAAGAATTGACCCACCAATGCCTGAGGCCTATTTTGGGAACCTAATCCAAGCCATATTCACCGTTACGGCGGCCGGGCTCCTGTCAGCCCACCCACCGCAATTCGGCGCTTCAATTGTCCAGAAGGCAATTGAAGCGCACAATGCTAAGGCAATTGATGAGAGGAACAAAGAGTGGGAGAGTGCACCAAAGATTTTCCAATTCAAAGATGCTGGAGTTAATTGTGTGGCTGTGGGAAGCTCCCCAAGGTTTAAAGTTTATGACATTGATTTTGGTTGGGGCAAGCCTGAGAATGTGAGGAGTGGCACCAATAACAAGTTTGATGGCATGATTTATTTGTATCCTGGTAAGAGTGGTGGTAGAAGCATTGATGTTGAGTTGACTTTGGATCCCAATGCCATGGAGATTTTGGAGCAAGACAAAGACTTTCTTCTTCTTGAGGTTTAA 1320 0.4682 MAESSLNLKITGKSHVKPKKNIGRKEYQLVTFDLPYLAFYYNQKLLFYKGSDFEGMVEKVKEGLSVVLEEFHQLAGKIGKDEEGVFRVEYDDDMDGVEVTEAVAEDVAVEDLAVAESSSSLLELIPYNGILNLEGMHRPLLAIQLTKLKDGLAMGCAFNHAVLDGTSTWQFMSSWAEICSGAPSTVAPPFLDRTKARNTRVKLDLSVPEPNGPTSENEEKPKPKLREKIFKFSESAIDKIKSTINENPPSDGSKPFSTFQALSAHVWRHITHARNLKPEDYTVFTVFVDCRKRIDPPMPEAYFGNLIQAIFTVTAAGLLSAHPPQFGASIVQKAIEAHNAKAIDERNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLDPNAMEILEQDKDFLLLEV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60761g00007 439 Gene3D - 5 207 IPR023213 -
Stsc60761g00007 439 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 435 - -
Stsc60761g00007 439 MobiDBLite consensus disorder prediction 204 223 - -
Stsc60761g00007 439 Gene3D - 209 431 IPR023213 -
Stsc60761g00007 439 FunFam Tryptamine hydroxycinnamoyl transferase 211 432 - -
Stsc60761g00007 439 Pfam Transferase family 8 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60761g00007 Stsc-Chr60761 39939 43078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60761g00007 40 430 Monolignol Biosynthesis Gene Families AT5G48930 26.420 9.47e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60761g00007 K19747 - gmx:100790669 750.355