Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60759g00005 ATGGGAGAGGTTTTGCCTCTGGCATGTTTTCCAGCTTTTGTGTCTGAACCAAATCGATTATGGCAAACGAGTAATTTCACAGATTCTTTGCTTCCTAAACTTGCCTTTCAAGTTGTCTACACTGTATTCGTAGCCCTCCTTTTCTCCCTTCTATTCAAACCCATTCATCAAACTCGCATTATTACATATGTCTTTGCTGGTTTCCTGTTAACTCCACCTCTGCTCAGGGGATTTCCATCCATCTTTGCTGTATTTTATCCTATAGATAGTGTATTCAATGTTGAGATTCTCTCAAACTTTGGCTTGATCTACTATGCGTTCCTGAATGGCTTAGAGATGAACTTGGACACCATTCTCAAGGCCAAAAAAGAATCTATAAGCATTGCAATTGCCGGAATAATCTTTCCATTTCTTACAGGATCAGGATTATATGCATTGCACCGAAAATTTTATATCAATAACAGTTTTCACCTTGAAGAAATCTCAACTCATGCTTATTTAATGTGGAGTTTAATTCTCACAGTCACAGGTTTTCCAAACCTAGTTGAAATCCTCTCAGAGCTCAAGCTTCATTACACTGGCTTAGGCAAGGTTGCATTAACCGCAGCCATGATAAGTGATACTTACAATTGGATTCTTTTCGCATTGCTAATTCCATTTTCATCACTTGATACTTCTAATGCGATTTATTCAGTAATAAGCACAATCTTATTTATTGTTGTGTGCGTCTTTTTGGTTCGTCCTATAATCACAAAGTACATTGAAAAGAAAACAGAGGAGAATGAATTGGATGAGTACTTACTCCTTTTTGTGGTGATGGGGCTTTTGCTATGTTCAAATATTACAGACATTCTTGGAACACATGGCATTGTTGGTGCTTTTGTGTACGGACTAATTTTGCCTCATGGGAAGTTTGCTGACTTTGTTATGTCTGTTTCTGATGATTTTGGTGGGGGGTTTCTAGCATCAGTTTACTTTTCTGGAACTGGGATGAGGCCACCTAAAGATGGTTTCGCCATTGGATTGCTTCTCAACACCAAGGGTGCCTTGGCATTAATATTGCTAAGCATTGCTTGGGATAAACTGATCTTTTTTGCGCCAACTTATGCTGTCCTCACTACTTCTGTTCTTCTAATGACCATGGTAGTCTCTCCGATCATTAACATGATCTTCAAGCCAAGAAAGCGATTTCAACAAACTAAGCTAAGGACCATACAAAAGCTAAGACTTGATGCAGAACTCAGAATTGTGGCATGTGTCCATTCTAATTCCCACGCTACCAGCATGATCAACCTCATTGAACTCTTCAATGCCACCAGACTTTCCCCAATCCACGTTTTCAGCTTGTACCTCGTAGAAATTACAAATCGTGCCACGGCTCTTGTTGTTGCTCACATGGAGAAGCCTACTCCCCAACTCGGAACTCAGAACACTCTCACCGAGTCTCAAGTCGAGTTGGAAAATATTTCATTTAACTTCCATTCTTTTGGAAATATGGACGGTCATGATGCTTTCAGGGTCGAGACCACGAGCGTGGTCTCGGCCTACCAAACCATTCATGAAGATGTATTCAACTCTGCCAGAGAAAAAGGCGCCAGCTTGATTCTCTTACCATTCCACAAACATTTAAGTCCCAACGGGAATCTTCTAGAAACCACGAATGCGGTGTATAGGGATATCAACAAGAACGTAATGCAAGATGCACCTTGTTCCGTTGGAATCTTGGTAGATCGGAATCTTGGATCGTTCAAGAAAACAAACCTTAGAATTTTTATGCTCTTCGTTGGAGGCCCGAACGATCGCGAAGCTTTGGCGATCGCGTGGAAGATGGCTAAGCATCGTAACGTTCAGCTATCGATGATTCGAATTTGTTTGTCTGATGAAGCTGCAGAAGTGGATCAATCAACTCATTCTGAAGAGGCACAGGGGATGTTATCTTATGTGATGGATAATGAGAAGCAAAAAGAGTTGGATGAAGAGTATATAAATAAATTCAGATATAGTGCTGTGAACAATGAGGATTCTGTATCTTACTCAGAAGTTGATATCCATACAGGTGAAGATGTGCCTAGAATGCTGAAGGAGGTTGATCAACAAGGTTGTGATTTGTACATTGTTGGACAAGGGAATGGAAGGAATTCTAGAATCTTCTCGATCTTGTTGGAATGGTGTGAGTGTTTGGAATTAGGGGTTATTGGGGATATTTTAGCATCAGATATTTTTTGTTCGAGCTCGTCTGTTTTAGTTGTTCAGCAATATGGTTTTGGAGGAATGCAATCTGGGAAAAATAATAATGCCTTTGAATCCCTCCTCGTGAAGACAGAATAA 2328 0.4029 MGEVLPLACFPAFVSEPNRLWQTSNFTDSLLPKLAFQVVYTVFVALLFSLLFKPIHQTRIITYVFAGFLLTPPLLRGFPSIFAVFYPIDSVFNVEILSNFGLIYYAFLNGLEMNLDTILKAKKESISIAIAGIIFPFLTGSGLYALHRKFYINNSFHLEEISTHAYLMWSLILTVTGFPNLVEILSELKLHYTGLGKVALTAAMISDTYNWILFALLIPFSSLDTSNAIYSVISTILFIVVCVFLVRPIITKYIEKKTEENELDEYLLLFVVMGLLLCSNITDILGTHGIVGAFVYGLILPHGKFADFVMSVSDDFGGGFLASVYFSGTGMRPPKDGFAIGLLLNTKGALALILLSIAWDKLIFFAPTYAVLTTSVLLMTMVVSPIINMIFKPRKRFQQTKLRTIQKLRLDAELRIVACVHSNSHATSMINLIELFNATRLSPIHVFSLYLVEITNRATALVVAHMEKPTPQLGTQNTLTESQVELENISFNFHSFGNMDGHDAFRVETTSVVSAYQTIHEDVFNSAREKGASLILLPFHKHLSPNGNLLETTNAVYRDINKNVMQDAPCSVGILVDRNLGSFKKTNLRIFMLFVGGPNDREALAIAWKMAKHRNVQLSMIRICLSDEAAEVDQSTHSEEAQGMLSYVMDNEKQKELDEEYINKFRYSAVNNEDSVSYSEVDIHTGEDVPRMLKEVDQQGCDLYIVGQGNGRNSRIFSILLEWCECLELGVIGDILASDIFCSSSSVLVVQQYGFGGMQSGKNNNAFESLLVKTE 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60759g00005 775 Pfam Sodium/hydrogen exchanger family 39 332 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc60759g00005 775 Gene3D - 334 401 IPR038770 -
Stsc60759g00005 775 Gene3D - 33 333 IPR038770 -
Stsc60759g00005 775 PANTHER CATION/H + ANTIPORTER 333 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60759g00005 Stsc-Chr60759 41587 45532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60759g00005 9 753 Antiporter Super Family AT2G13620 35.176 4.64e-158 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60759g00005 - - adu:110272786 1018.45