Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60753g00007 ATGGTTGTTATCGATGAAAATAAATCTACATATGTAAGCATTGGAACCGTTGTTGAGTTTACCCCTGAAAAATCATGGTGGTACATGGGATGCAAAAGTTGCAAATATGAATTGAAAAAGGGTGCTAATTTTTATAGTTGTCGAATGTGTGGTGATGGAATCCAGACATTTGAACCAAGATATTCTCTTCATCTTAAGGTTGATGATGAGACTGATATAGCATCCTTCATTATTTATGAAACTGTTAGAGATGCTTTTGTTGGTGTTACTGCTGACAATTTAAGATCCACTCACTTGCTTAGAGGTGGTGCCAAAGATGAATTTCCGAAGGAGTTGGATGTTTTTATCGGAAAAAAATTTCTCTTCAAAGTTATTGTGAAGTTAGAGAATATTAACGCTTTCCAACCTGTTTCGATATCTGTGGTCAAACTTTGTGATGAAGAAAGCATAATACATGCCTTTGTTGAGAAGTACAACATTGATAATGTACCTCTTATTGAGAATAACAATGAGTCATTGATGCTAACACAAAATAGCAATTGCCAGGAAATAAGCAAGGTTTCTGAGACAAAAGCTGTTGACGACAGTTCTGTACTCCTGCAAAATCTGAGGAGAAACATATTACCTGTTCTAGCCTTGATGATCCTCTCCATGATAACAACTTAA 666 0.3559 MVVIDENKSTYVSIGTVVEFTPEKSWWYMGCKSCKYELKKGANFYSCRMCGDGIQTFEPRYSLHLKVDDETDIASFIIYETVRDAFVGVTADNLRSTHLLRGGAKDEFPKELDVFIGKKFLFKVIVKLENINAFQPVSISVVKLCDEESIIHAFVEKYNIDNVPLIENNNESLMLTQNSNCQEISKVSETKAVDDSSVLLQNLRRNILPVLALMILSMITT 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60753g00007 221 Pfam Replication factor-A C terminal domain 11 144 IPR013955 -
Stsc60753g00007 221 SUPERFAMILY Nucleic acid-binding proteins 4 145 IPR012340 -
Stsc60753g00007 221 CDD RPA1_DBD_C 5 143 IPR047192 -
Stsc60753g00007 221 Gene3D - 2 157 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60753g00007 Stsc-Chr60753 43887 46332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60753g00007 4 141 Core DNA Replication Machinery Family AT5G08020 25.000 1.99e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60753g00007 - - adu:107473575 176.792