Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60753g00005 ATGATGATCATGGAGGTTCTTCATCATGATGGAGCTATAATAATCTGCCTCTTGTTATTGACTCTGTTTTCAAGACCCTTAGAAGGGTACAAATTCTATGTTGGTGGCAAAGATGGTTGGGTTGTGAACCCTTCTGAGAGTTACAACCAATGGTCTGGAAGGAACAGGTTCCAAGTCGGTGACACATTGGTGTTTAAGTACAAGGAGGGATCAGAGTCAGTGTTGGAAGTGAAGAAAGAAGACTATGAGAAATGCAACAAAAAGAAGCCAATAAAGAAACTAGAAGGTGGTGATAGTAGTGAGTTCCAATTTGATAGGTCAGGTCCATTTTACTTCATTAGTGGAAATGATGATTACTGCGAGAAAGGTCAGAAGGTTATTGTTGTGGTGTTAGCTCAGAGACCACCACCACCACCTTCTCAAACTCCTTATGTTCCTTATCCACCAAAATCTCCTCCTTCACCGATTCATAATCCACCTTATGTTCCAATTGTTCCACCACAAGCTCCTTCACCCGGCCACAACAATCATCATCCCAACCCTCCATATACTCCAATTGTTCCACCAAAGACACCATCACCACCTTATGTTACTCCAACTCCACCACAGGCACCTTCACCTGGCCATAATAATCATCACCCTAATCCCCCATACACACCAATTGTTCCACCAAAAACACCATCACCACCTTATGTTACTCCATCTCCACCACAATCTGCACCATCCCCTGGCCACAACAATCATCACCCTAACCCCCCATACACACCAATTGTTCCACCAAAAACACCATCACCACCATATGTCACTCCATCTCCACCACAATCTGCACCATCCCCTGGCCATAACAATCAACACCCTAACCCTCCATATACACCAATTGTTCCCCCAAAAACACCAACACCACCATATGCTACACCGTCTCCACCACAATCTGCACCTTCCCCTGGCCATAACAATCAACACCCTAACCCTCCTTACACTCCAATAGTTCCACCAAAAACACCATCTCCAACTCCACCACAAGAAGCTCCTTCACCAGGACATGGAAATTACCATCCTAACCCTCCATATGTCCCATCACCAGGTGGTGGTAACACTCCAACACCACCACAAGCTGCTCCTTCCCCTGGCAACAACAATCATCACCCTAACCCACCATATGTTCCAACACCAACATCACCACCACAAGAAGCTCCTTCCCCTGGCAACAACAACAACAACCATCACCCAAACCCTCCAAATGCTCCACCAAAAACACCTTCCCCTGTTCCAAACTCTCCAATTTCTCAACCACCATATACCTCATCACCTTCTCCACCATCTCAGCCTCCTTACACCCCATCAACACCACCAAAAACCACCCCTTCTCAGCCACCATACACTAGTGCTGCTCCAACACCAACATCTTCATCACAACCACCCTCCCCTGTTTCCCAACCTCCCACCGGCACCGGCACCGGAACTGCACCCATAGGCTCACCACAGTACTCTCCAACAGCACCATCACCATTAATCTCTCCGACACAGCCACCTTCAGTTTCAACTCCATCACCAGCAGCAAACTCTCCGGTCCCTGCCACGTCATCACCACCCTCACTGTCACCTTCCATTTCCCCAGCCGGTGGTGCGACTCCTCTCGCCTCCCCGCCTTCCCCTCCCGGAGCGGCAACTCCTGCAGCCTCGCCGGCGTCGTCTTCGAACGAAACGACACCAGGAACGCCAAACGGGAAGCAGTCGTCGTCTGCATGGGCTGCAAATCCATCAGGAGTTAGGGTTAATTCAGGCATCGCCATTTTCGTTGCTGCTGCACTAAGCACTATTATTGCCTAG 1830 0.4896 MMIMEVLHHDGAIIICLLLLTLFSRPLEGYKFYVGGKDGWVVNPSESYNQWSGRNRFQVGDTLVFKYKEGSESVLEVKKEDYEKCNKKKPIKKLEGGDSSEFQFDRSGPFYFISGNDDYCEKGQKVIVVVLAQRPPPPPSQTPYVPYPPKSPPSPIHNPPYVPIVPPQAPSPGHNNHHPNPPYTPIVPPKTPSPPYVTPTPPQAPSPGHNNHHPNPPYTPIVPPKTPSPPYVTPSPPQSAPSPGHNNHHPNPPYTPIVPPKTPSPPYVTPSPPQSAPSPGHNNQHPNPPYTPIVPPKTPTPPYATPSPPQSAPSPGHNNQHPNPPYTPIVPPKTPSPTPPQEAPSPGHGNYHPNPPYVPSPGGGNTPTPPQAAPSPGNNNHHPNPPYVPTPTSPPQEAPSPGNNNNNHHPNPPNAPPKTPSPVPNSPISQPPYTSSPSPPSQPPYTPSTPPKTTPSQPPYTSAAPTPTSSSQPPSPVSQPPTGTGTGTAPIGSPQYSPTAPSPLISPTQPPSVSTPSPAANSPVPATSSPPSLSPSISPAGGATPLASPPSPPGAATPAASPASSSNETTPGTPNGKQSSSAWAANPSGVRVNSGIAIFVAAALSTIIA 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60753g00005 609 Gene3D - 29 134 IPR008972 -
Stsc60753g00005 609 MobiDBLite consensus disorder prediction 133 587 - -
Stsc60753g00005 609 MobiDBLite consensus disorder prediction 496 532 - -
Stsc60753g00005 609 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Stsc60753g00005 609 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Stsc60753g00005 609 MobiDBLite consensus disorder prediction 133 398 - -
Stsc60753g00005 609 PANTHER BLUE COPPER PROTEIN 31 192 IPR039391 GO:0009055
Stsc60753g00005 609 CDD OsENODL1_like 30 131 IPR041846 -
Stsc60753g00005 609 MobiDBLite consensus disorder prediction 410 462 - -
Stsc60753g00005 609 MobiDBLite consensus disorder prediction 481 495 - -
Stsc60753g00005 609 FunFam Early nodulin-like protein 1 29 135 - -
Stsc60753g00005 609 MobiDBLite consensus disorder prediction 558 587 - -
Stsc60753g00005 609 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60753g00005 Stsc-Chr60753 29652 32026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60753g00005 15 206 Phytocyanin Superfamily AT5G53870 44.949 3.02e-47 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60753g00005 - - aip:107613132 296.975