Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60750g00010 ATGGCAGATTTCTTACCCCTGCTGCTGCTTCTAAGTTTGAATCTCATCAACATTGCAATTTGCCACGATGATCCTGTTCAATGTCCTGTCCGTCTGTACTGTAAAAATAACGAATCCAATATTCTTGAGCTCCCCGGCGTTACGTCCTCGGTAAAACTTCCCGTAGGTCGCATTAATTTCAAATCAACAACTTTGGAAGTGAATGGTGACGGAATTTGCTTGACAGAACTCTTTCTCAGACTCGATTATTCATCATTCTATCCATTCCAATCCATAGGAGCAGATTTTGATGTCGCTGGTACTAGTGATGACTATGACTACTACTCACTTGAACCAAGAAACATTACTTTCTTTCGTTGCCCTCCATGCACGGCAATCTGCCGGATTCAAGTGGCTGAGGATGACGTCGGCGTCATCCACTCGGAACTGGTATACTGTACAAAACTGTCTCGTCAAGTTTTGCCAATACCAGCAAATTTTATATGGGAAGGTTCATTCTACATGGTATGGTCCAAAACAAAGTTGAATAGTGAATGCTTTGTTGGTTGCAACAAACCCCACAAGGGGACTCAATACTATGAATCTATTCTTTTACCGATTACAGGTGCAATTATCCTTTTGTCAATCATGAGTGCCCTGTACCATATATATTGCTATTATAGAAACAAAGGAGAAGATCAACAAAGAGTAGAAACCTTTTTGAAGGACTACGAGGCATTGAATCCAACAAGATTTTTTCATGCCGATATCAAGAGAATCACAAACCAATTCAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTGTCCAATCATATTCTTGTTGCTGTCAAGGTTCTTACTACCACAGAAGGAGATGGGAAAGAATTCATAAATGAAGTTGGAACTATGGCTAAAATCCATCATGTCAATGTAGTTCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGTGCATTAGTTTATCACTTCTTCCCCAAAGGTAATCTGCAAGGCTTCATGGCTTTACCAAGCAACAAGGAAAGCTTCCTCGGATGGAACAAGATGCATCAGATTGCTCTAGGCATAGCCAAAGGGATTGAATATCTTCACCAAGGTTGTGATCAAAGAATTCTGCATTTTGACATTAATCCTCGCAATGTCTTGTTAGATGAAAGTTTCACTCCCAAAATCTCAGACTTCGGTTTGGCTAAGTTATGCCCAAAGAATAGAAGTACAGTTTCCATGACTGCAGCTAGGGGAACATTAGGGTACATGGCGCCTGAAGTTTTCTCTAGAAACTTTGGCAATGTATCTTACAAATCTGATATCTAG 1329 0.4101 MADFLPLLLLLSLNLINIAICHDDPVQCPVRLYCKNNESNILELPGVTSSVKLPVGRINFKSTTLEVNGDGICLTELFLRLDYSSFYPFQSIGADFDVAGTSDDYDYYSLEPRNITFFRCPPCTAICRIQVAEDDVGVIHSELVYCTKLSRQVLPIPANFIWEGSFYMVWSKTKLNSECFVGCNKPHKGTQYYESILLPITGAIILLSIMSALYHIYCYYRNKGEDQQRVETFLKDYEALNPTRFFHADIKRITNQFKDKLGEGAHGAVYKGKLSNHILVAVKVLTTTEGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPKGNLQGFMALPSNKESFLGWNKMHQIALGIAKGIEYLHQGCDQRILHFDINPRNVLLDESFTPKISDFGLAKLCPKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDI 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60750g00010 442 Gene3D Transferase(Phosphotransferase) domain 1 330 442 - -
Stsc60750g00010 442 PANTHER RUST RESISTANCE KINASE LR10-RELATED 226 442 IPR045874 GO:0004672
Stsc60750g00010 442 SUPERFAMILY Protein kinase-like (PK-like) 236 442 IPR011009 -
Stsc60750g00010 442 Gene3D Phosphorylase Kinase; domain 1 228 329 - -
Stsc60750g00010 442 FunFam Os07g0541700 protein 332 420 - -
Stsc60750g00010 442 FunFam serine/threonine-protein kinase PBS1-like 222 329 - -
Stsc60750g00010 442 ProSiteProfiles Protein kinase domain profile. 255 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60750g00010 442 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Stsc60750g00010 442 Pfam Protein tyrosine and serine/threonine kinase 257 442 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60750g00010 Stsc-Chr60750 44981 46385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60750g00010 217 442 Receptor kinase-like Gene Family AT1G66980 49.780 3.90e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc60750g00010 PK_Tyr_Ser-Thr 6.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60750g00010 - - adu:107495716 596.275