Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60750g00006 ATGGCAGCATTATTATTATTATCGCTACTGCTGCTGAATTTGAATCTGGACATCGGAATTTGCCTTCAATGTCCCGTGAGTGTGTCCTGTTCAGAAAACAACACCAATATTCTTGAGCTTCCACCTTCAGTGAAACTCCCCGTCCATGGCATTGATCACAGATCAAATTCTTTAGAAATTTCTGATCCCGAAGAGTGCCTTCCGGAACTCTTTCTCAGACTCAATTACTCATCATCATTATTTTATCCTTTTAAATCCATTAGATTCTACGGTACTTATCAAACTCCTCTTGATGTGCGGACCAACGTTACTTTCTTTAATTGTTCTTCAAGAGGGAAACCTTTACCTTGCCCTATTCATGTGGCTGACAATTACGATTTGGTCGACTTAAACTTGGTGTCCTGCAAAAAACTGGTTAGTCAGCTTATGCCAGTACCCACATCTATGTTACAGGAAAATTCAATCAGATTGATATGGAATACAAGTTTCCAAAGTGACCATCAATGCTTTGTTCCTTGCAACAGAGGGAAGCGGAAGCATAAAGTTCATGAATCTATTATTTTACAGACTGCAGGTGCAGCTCTCCTTTTGTCCATACTGGGTGCCTTGTATCTTATATATCACTATTATAGAAACAAAGGAGAAGATCAACAAAGAGTTGAAACTTTTTTGAAGAACTATGAAGCATTAAACCCCACAAGATTCTCTTATGCTAATATCAAGAGAATCACAAAGCAATTCAAGGACAAGTTAGGTGAAGGAGCTCACGGAGCTGTTTACAAAGGTAAATTATCCAATCAAATCCTTGTCGCTGTCAAGATTCTCAATACCACTGAAGGAGATGGCAAAGAATTCATAAATGAAGTGGGTACTATGGCTAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTAGTTTATCACTTCTTCCCCAAAGGTAATCTGCAAAATTTCATGGCTTTGCCGAGCAACAAGGAACGCTTTCTCGGATGGAACAAGTTGCATCAGATTGCCCTGGGCATAGCCAAAGGGATTGAATATCTTCACCAAGGTTGTGATCAAAGAATTCTGCATTTTGCCATTAATCCTCGCAATGTCTTGTTAGATGAAAGTTTCACTCCCAAAATCTCAGACTTCGGTTTGGCTAAGTTATGCCCAAAGAATAGAAGTACAGTTTCCATGACTGCAGCCAGGGGAACTTTAGGGTACATGGCACCAGAAGTTTTTTCTAGAAACTTCGGCAATGTATCTTACAAATCTGATATCTACAGTTATGGTATGTTACTACTTGAGATGGTTGGAGGAAGAAAAAATGCAAATTCCAGTGAAGAAACTTTTCAAGTTCTATATCCAAATTGGATACATAGTTTGCTTGAAGGAGATGACACCTATATTCCAATAGACGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCTGTGCACCGTCCCTCCATGAAAGGTGTAGTTCAAATGCTTGAAGGAGGAGAAGAACAACTGAAAGTGCCGCCAAATCCTTTTGAATCTGCAGCTGCAAGTAGCTCAAGTGCAATTATTCCAGCAAGATGCTTGAATTTGGAATTGGAAGTGATTCCAGAAACAGATTAG 1671 0.4016 MAALLLLSLLLLNLNLDIGICLQCPVSVSCSENNTNILELPPSVKLPVHGIDHRSNSLEISDPEECLPELFLRLNYSSSLFYPFKSIRFYGTYQTPLDVRTNVTFFNCSSRGKPLPCPIHVADNYDLVDLNLVSCKKLVSQLMPVPTSMLQENSIRLIWNTSFQSDHQCFVPCNRGKRKHKVHESIILQTAGAALLLSILGALYLIYHYYRNKGEDQQRVETFLKNYEALNPTRFSYANIKRITKQFKDKLGEGAHGAVYKGKLSNQILVAVKILNTTEGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPKGNLQNFMALPSNKERFLGWNKLHQIALGIAKGIEYLHQGCDQRILHFAINPRNVLLDESFTPKISDFGLAKLCPKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNANSSEETFQVLYPNWIHSLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKGVVQMLEGGEEQLKVPPNPFESAAASSSSAIIPARCLNLELEVIPETD 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60750g00006 556 FunFam serine/threonine-protein kinase PBS1-like 212 319 - -
Stsc60750g00006 556 SUPERFAMILY Protein kinase-like (PK-like) 223 515 IPR011009 -
Stsc60750g00006 556 FunFam PR5-like receptor kinase 320 526 - -
Stsc60750g00006 556 ProSitePatterns Protein kinases ATP-binding region signature. 251 273 IPR017441 GO:0005524
Stsc60750g00006 556 ProSiteProfiles Protein kinase domain profile. 245 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60750g00006 556 Pfam Protein tyrosine and serine/threonine kinase 247 452 IPR001245 GO:0004672|GO:0006468
Stsc60750g00006 556 PANTHER RUST RESISTANCE KINASE LR10-RELATED 216 532 IPR045874 GO:0004672
Stsc60750g00006 556 Gene3D Transferase(Phosphotransferase) domain 1 320 526 - -
Stsc60750g00006 556 Gene3D Phosphorylase Kinase; domain 1 217 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60750g00006 Stsc-Chr60750 23694 25509 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60750g00006 207 527 Receptor kinase-like Gene Family AT1G66980 47.720 1.70e-97 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc60750g00006 PK_Tyr_Ser-Thr 6.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60750g00006 - - adu:107495716 768.459