Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60748g00008 ATGCTACCTAGTAGCCTAGGTGAATTGATCCACCTGCACTATTTGAATGTCTCTGGAAGTGCTATTAAGACATTGCCAGAGTCACTGTGCAAGTTGTCTTATTTGCAAACATTGAAGTTAGGAAGTTGTTCAAAGCTGACTATGCTGCCGAATGGCATGTATAATCTCGTGAATTTGCGGCATCTTGACATAACGGGTACTCCTCTAAAAGAAATGCCAAAAGGAATGGGCAAATTGAAACAGTTGCACATTTTAAGCAATTACATCGTAGGCAAGCAAAAGGAATATGGAATCCAAGAGTTAGGAGGGCTTTTAAATCTTCATGGTTCATTTCTGATTCAGAAATTGGAGAATGTTGTTGATATCAATCAGGCAAGGAATGCAAGGATAATGGATAAGAAGCACATTGACAAGTTATGGCTGGAATGGTCTTCAGGTAATGATATGGTTTCAAACATACAAATTGAAGGAGATGTACTCAACAACTTGCGACCGCACACTGGCTTGAAAGAGTTGATAATCGATGGATACAAGGGTAAAATATTTCCAGATTGGTTGGGGCAACATTCCTACAACAATATGACAAGTGTATCTCTGTATTCTTGCAAGAATTGCTGCAAACTACCTTCACTTGGACAGCTGCCATCTCTTAAGTCTCTCACAATATATGGTTTTAGTGAGCTTAAGTGTATTGGGGATGAGTTTTACAAGAATGAAGATGATCATACTTTGCATATCGTTCCTTTTCCCTCACTAGAGACATTAAAATTTATGCAGATGCCATGTTGGGAGCTGTGGTACTCACCTAGCTCAGAAGCTTTTCCTCAGCTTAATAATCTTGAAATAGAGGAATGTCCAAAGTTAAAGGGAGATATAGTTAATCAGATATTCATGAGAATCGTTTCTTCATCATCTGATGTTTCGAAAGTCCGCACACTGTTTATGCATGCAGAAAACTTTACAGGAATGTCACTTGATGGGGATAGTTTATCACTCAGGGGATGTGAATGGTTGGTGGAGTCTACATTTATGGCGACGATCATCCACCATCTAACTTCCCTCCAAGACATAGAAATCAATGGTTTTTTGTGTGCTGCCATTTCTTTACCCAAATCTTTACAAAAGCTGGTAATCTGGAATTGTACAGAACTGGAATTCCCGGAGCAACAGCAGCACAAGTATGATTTGGTAGAGCTAGAAATATATGCCAGCTGCGATTCACTGGCCTCATTGTCCTTGGATGCCTTTCCCAATCTCAAGACTCTTTCCATATCAGAGTGTTCAAATCTAGAATCAATTTCAATGTCAGAGCCACCACACACTGCTCTTCAAAGTCTCACCATCACTCGGTGCCACAAATTGGAGGCATTGCCGCGTAAGATGGATACTCTAGTCCCAAATTTACAGTCTCTCCACATCCAAGATTGCGGAAGAATTTGTAGGTTTCCAGAGGGTGGTTTGCCACCTAACTTGCAAAAGCTTTGTGTGAATGGTTCCGATGTACTATTAAGGGGTCTGTCATCGATGGGAAAATTGGAAGCCCTCACACATCTCGAGATTTACGCTTGCGATTATGAGAGCAGAATAAATTCATTCCCAGAGGTGGATACGCTGCCTCACCTTCCCTCCCTTACCACTCTACAGATCAGTTCTTTTCAGAATCTGGAGACGTTGGAGTGCAACGAGCTTCTCCACCTCACCTCCCTCCAACAATTACACATACAATACTGTCGGAATTTGCAGTATCTGGAAAGAGAAAAGCTGCCTTCTTCTCTCTTACTACTTGAAATTAAAGACTGTCCTCTGCTGGAAGAAGGCTGCGAGAACAAGCATCAACATATTTGGCCCAAAATTAAACACATCCCCACCATTCGACTCAACTACGAAGATTTTTCTAAATAG 1902 0.4111 MLPSSLGELIHLHYLNVSGSAIKTLPESLCKLSYLQTLKLGSCSKLTMLPNGMYNLVNLRHLDITGTPLKEMPKGMGKLKQLHILSNYIVGKQKEYGIQELGGLLNLHGSFLIQKLENVVDINQARNARIMDKKHIDKLWLEWSSGNDMVSNIQIEGDVLNNLRPHTGLKELIIDGYKGKIFPDWLGQHSYNNMTSVSLYSCKNCCKLPSLGQLPSLKSLTIYGFSELKCIGDEFYKNEDDHTLHIVPFPSLETLKFMQMPCWELWYSPSSEAFPQLNNLEIEECPKLKGDIVNQIFMRIVSSSSDVSKVRTLFMHAENFTGMSLDGDSLSLRGCEWLVESTFMATIIHHLTSLQDIEINGFLCAAISLPKSLQKLVIWNCTELEFPEQQQHKYDLVELEIYASCDSLASLSLDAFPNLKTLSISECSNLESISMSEPPHTALQSLTITRCHKLEALPRKMDTLVPNLQSLHIQDCGRICRFPEGGLPPNLQKLCVNGSDVLLRGLSSMGKLEALTHLEIYACDYESRINSFPEVDTLPHLPSLTTLQISSFQNLETLECNELLHLTSLQQLHIQYCRNLQYLEREKLPSSLLLLEIKDCPLLEEGCENKHQHIWPKIKHIPTIRLNYEDFSK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60748g00008 633 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 330 607 - -
Stsc60748g00008 633 Gene3D Ribonuclease Inhibitor 484 599 IPR032675 -
Stsc60748g00008 633 SUPERFAMILY L domain-like 299 617 - -
Stsc60748g00008 633 SUPERFAMILY L domain-like 2 290 - -
Stsc60748g00008 633 Gene3D Ribonuclease Inhibitor 1 98 IPR032675 -
Stsc60748g00008 633 Gene3D Ribonuclease Inhibitor 296 483 IPR032675 -
Stsc60748g00008 633 Gene3D Ribonuclease Inhibitor 104 295 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60748g00008 Stsc-Chr60748 32719 36540 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60748g00008 2 85 WRKY Transcription Factor Family AT4G12020 36.471 8.13e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60748g00008 - - aip:107622623 775.393