Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60748g00005 ATGGAATATGGAGCTGAACTCGTGAAATGTGTTGAGCCTGAAACAGTTCCACCTGCGGTAGAAGAGAAATTGGAACCTAAACAGCAGACAGAAGAGCAGGAAGAGGTTCACTATTCTGAGGAATCATCAGATGGCTGGATGCTAGAGAGGTTGAAGTCCATCAACTTGAGTTTTTCCAAGAACCTAAACCAAACCCCTGACTTTTCTGAAGTTCCCAATCTTGAATCATTGGTTCTTGAAGGTTGTACAAGCCTGACCATAATCCACTCATCCCTTATGCACCTCAAAAAACTTGTTCAATTGAATTTGAAAGACTGTAAAAGGCTCAAAGCTCTTACAGGTAAAATGGAGATAAGTTCACTAAAGTACTTAGATTTTTCCGGTTGCTCAGAATTGAAAACTGTCCCAGAGTTTGGGGGTTGCATGAAACATCTATCGATGCTTTCTTTCGAGGGAACTGCTATAACAAAGCTACCCTCATCACTAGGATGTCTACTTGGACTTGCTGTATTGAAGTTAAAGAATTGCAAGAATCTTTCCAAGCTTGAATACCTGGGTCTAAATGGGTGCAAAAAGCTCAAGTTGTTGCCAGAGCTTCCATTAAACTTAAAAAGATTAGATGCAAGCAATTGTACATCACTGGTAACTTCCACGTTTCGACCATCTAGGCTGCCATCCCGGCGACCGAAGACTTATGAACCACCATCTATACAGTTGCACATACCAACAGAATTGAAGAACCTTTTTAAGGGGCTTCGCTTTGCCGCCACAACATTTGAAATGGTTATACCAGGAAGTGATATTCCATCCTGGTTTGCACCTCAAAAATTCTCTTCATATGCAGAAAAGCCATTCTTCACTGCTTTTCCTCCAACCGAAGGGGTGGGATATGCCATGTGTTTCTTACTAGAAAGTAGCGTGAAACCATCGCAGATGTGTCGTCATAAAATCACATGTTCCATTGGAAGACCAACACAATCAGAAGATGGTTTTTATTTCCTTCGTCACCATTTAGATTTACCTCGTCTTCCGCTGGATGAAATACAACGATCTCTGAAAGGCAAACAGTTTCAAAATAATGATTTGCAAACACAATTAGAAGATGTTGTTTCTTTTCTTCCCTCTATTTTTCTGGAGCCAAGAAGACGATCTTTGAATGGCAAACAATCAAAAGTAGGTCCTCTTGGTCACCAAAATGAAAAGAAAGTTGATCCTGCCATAATTATCACCAGCAGAAATTTACCTCTTATGCAGCCAAATCGCCGTCATCTTTATATTCTCTTTGTGTCCATTAAAGAGTACACCAAGAGAAGCAGGGGAGCTGATGATGGCTTTCAGTTGAAGAGCAGTTGTGGTTGTGGTTCTCTGAAGATACTCAAGTGTGGGTGTCATTTGGTGTGCAAGAGCGATGTTGAAGATCTTTATGGAACCAGAAATGATACTTTATTTCATTTTGGGTGTGGATACTAA 1470 0.4061 MEYGAELVKCVEPETVPPAVEEKLEPKQQTEEQEEVHYSEESSDGWMLERLKSINLSFSKNLNQTPDFSEVPNLESLVLEGCTSLTIIHSSLMHLKKLVQLNLKDCKRLKALTGKMEISSLKYLDFSGCSELKTVPEFGGCMKHLSMLSFEGTAITKLPSSLGCLLGLAVLKLKNCKNLSKLEYLGLNGCKKLKLLPELPLNLKRLDASNCTSLVTSTFRPSRLPSRRPKTYEPPSIQLHIPTELKNLFKGLRFAATTFEMVIPGSDIPSWFAPQKFSSYAEKPFFTAFPPTEGVGYAMCFLLESSVKPSQMCRHKITCSIGRPTQSEDGFYFLRHHLDLPRLPLDEIQRSLKGKQFQNNDLQTQLEDVVSFLPSIFLEPRRRSLNGKQSKVGPLGHQNEKKVDPAIIITSRNLPLMQPNRRHLYILFVSIKEYTKRSRGADDGFQLKSSCGCGSLKILKCGCHLVCKSDVEDLYGTRNDTLFHFGCGY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60748g00005 489 Gene3D Ribonuclease Inhibitor 12 253 IPR032675 -
Stsc60748g00005 489 SUPERFAMILY L domain-like 47 206 - -
Stsc60748g00005 489 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 43 137 - -
Stsc60748g00005 489 MobiDBLite consensus disorder prediction 16 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60748g00005 Stsc-Chr60748 25523 27571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60748g00005 48 296 WRKY Transcription Factor Family AT4G12020 28.740 2.53e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60748g00005 - - ahf:112733298 190.274