Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60747g00003 ATGGAATGTGCTTCTTCTTCTCTTTCTGCTTCTGCATCTTCTTCTGCGTCGTCATCTTTGATGGCTGAAAATAATAGTATTGGGATCGTTCATCGGAGCGGCGAGGATGAGAAGAGGAAAGGAGGGAGATTAATGAAGAAGAAGATGAAGCCAAGGTTTGAGTTTCAAACAAGAAGTGCAGATGATATTCTTGATGATGGATATCGGTGGAGAAAATATGGACAGAAAGCTGTGAAGAACAGCATGTATCCAAGAAGCTACTACCGGTGCACACATCACACATGCAATGTGAAGAAACAAGTTCAAAGGTTATCCAAAGACACAAGCATAGTGGTCACAACTTATGAGGGAATTCACAATCACCCATGTGAGAAGCTTATGGAAACCCTAACTCCTCTTCTCAGGCAAATGCAATTTCTAGCTAGCTTCTAA 432 0.4167 MECASSSLSASASSSASSSLMAENNSIGIVHRSGEDEKRKGGRLMKKKMKPRFEFQTRSADDILDDGYRWRKYGQKAVKNSMYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLRQMQFLASF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60747g00003 143 ProSiteProfiles WRKY domain profile. 59 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60747g00003 143 Pfam WRKY DNA -binding domain 65 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60747g00003 143 MobiDBLite consensus disorder prediction 31 50 - -
Stsc60747g00003 143 SUPERFAMILY WRKY DNA-binding domain 57 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc60747g00003 143 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 125 IPR044810 GO:0003700
Stsc60747g00003 143 SMART WRKY_cls 64 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60747g00003 143 FunFam WRKY transcription factor 57 50 124 - -
Stsc60747g00003 143 Gene3D WRKY domain 49 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60747g00003 Stsc-Chr60747 8615 10086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60747g00003 17 143 WRKY Transcription Factor Family AT5G41570 64.341 3.21e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc60747g00003 WRKY 9.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60747g00003 - - gmx:100127398 205.682