Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60743g00008 ATGGAGATATCTCTAGGGACAGAAGAAAGTAAGTCACTTTCATTGGATACAACATCCCAGTCTCATTCAAATGCTACAAGCACATCAGTGAGCCAAAATGTTCATGCTTTTGAAAGTGCTTTACCAACTGAACACAATGATGCCAGGGCTTCATCATCAATGCAAAGTCATTCTGCATCTTCATCATGTAAAGAAGTTGTTCAATCAAAGCCTTTGGAACCTGCACAAGTAGAAAAACAAATGTCTGAATCTTCTCCTTCTGTTGATAGCACTAAGGGAAGTAAATTAGACTTGTGTGAAAACGAGTCTTCCCCTAAAAAACAAGGAAACAAAGCATCTGTGCCAAAGAATGGGCGGAAAGGCAGGCTGCAATCTTCCTCTTCTACCTCAGCAAATGGCAATAGAGTGAGCAAACAGACGCGAAACGCCCCTCGAACAGTCAAAATGGTCATCAAGAACAAGGGTTTGGGAAAGAAGAAATTAAAGCAGGGTTCAGGTTCTGCTTCATGTGATCCCAGATCCAATGATGTAAATAACAAGCCAGCTCCATTGGTGTGTGAGAGATGTTTTTGTGCTATAGAAAACAAAGGTAAAGAAAACAGCCAAGATATGGAGTCTATCAGGCCTGGAGATGGAGTAAACTCGAGTAGTGTGCGGTCAGGCTTGGTTTCGACTAGCTGCAATAGTGGCAGAGAAATTACAGAGGTGAAAAAGAATACCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGGTGATTACAGCAGTAGTACCAGTACCAGTGATGAGAGCAATGTCAGTGGCTCTACTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTCGGTGGGAAGCCATTCGACATGCTCAAATGCGCCATGGAGTCTTGGGATTGAGACATTTTAATCTTTTGAAGAAACTTGGCTGTGGAGACATTGGGACTGTTTATCTTGCTGAACTGATTGGCACAAATTGCTTGTTTGCTATTAAGGTTATGGACAACGAATTCTTGGCAAGAAGGAAGAAGATGCCTCGGGCTCAAACCGAAAGAGAAATATTAAGGATACTGGATCATCCTTTTCTTCCAACAATGTATGCACAGTTTACATCAGATAATCTGGCATGTCTGGTCATGGAGTATTGTCCTGGTGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGTAGAAGTTTCTCAGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAATACTTGCACATGCTTGGAATTGTTTACCGTGATTTGAAACCCGAAAACATTCTAGTTAGAGAAGATGGGCACATTATGCTGACAGATTTTGATCTCTCACTGAGGTGTGATGTTAGCCCAACGCTTCTAAAACAATCTTCAGACATGGATCCAGCCAAGGTTTCCGGTCCATGTGTACAATCGAACTGCATTGAGCCGTTCTGCATCGAACCGGTGTGTCAAGTTCCATGCTTCAGCCCAAGATTCTTACCTCCTGCTGCAAAGGCAAGGAAACAGAAAGCTGAACTTGCTGCCCAGATCAGATCACTACCACAGCTCGTGGCCGAGCCGACGGACGCAAGATCGAATTCATTTGTAGGCACTCATGAATACTTAGCACCAGAGATCATCAAAGGGGAAGGACATGGAGCTGCAGTTGATTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGAAGAACACCCTTCAAAGGCTCCAACAATGAAGAAACCTTAGCCAATGTGGTTCTGCAGAGTCTAAGGTTCCCTGATACCCCTTTTGTTAGTTTCCAAGCAAGGGACCTTATAAGAGGCTTGTTGGTCAAGGAACCTGAGAACCGTTTGGGTACTGAGAAAGGTGCTGCTGAGATTAAACAGCATCCCTTCTTTGAAGGTCTTAATTGGGCCTTAATACGTTGTGCTACACCACCAGAAGTACCAGATTTATGTGAGTTTGAGTTTTCAGAGATTACATCACAATCACAACCACAACCAGAGTCACATGGTAATAAGGGTGGGAAATATTTAGAGTGTAAAACAACAGGGGAACAAGTGGAGTTTGAATTGTTTTGA 2097 0.4282 MEISLGTEESKSLSLDTTSQSHSNATSTSVSQNVHAFESALPTEHNDARASSSMQSHSASSSCKEVVQSKPLEPAQVEKQMSESSPSVDSTKGSKLDLCENESSPKKQGNKASVPKNGRKGRLQSSSSTSANGNRVSKQTRNAPRTVKMVIKNKGLGKKKLKQGSGSASCDPRSNDVNNKPAPLVCERCFCAIENKGKENSQDMESIRPGDGVNSSSVRSGLVSTSCNSGREITEVKKNTRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSTCGNRPHMSKDVRWEAIRHAQMRHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLACLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKQSSDMDPAKVSGPCVQSNCIEPFCIEPVCQVPCFSPRFLPPAAKARKQKAELAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDTPFVSFQARDLIRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCATPPEVPDLCEFEFSEITSQSQPQPESHGNKGGKYLECKTTGEQVEFELF 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60743g00008 698 MobiDBLite consensus disorder prediction 119 146 - -
Stsc60743g00008 698 MobiDBLite consensus disorder prediction 245 279 - -
Stsc60743g00008 698 MobiDBLite consensus disorder prediction 207 233 - -
Stsc60743g00008 698 FunFam Serine/threonine-protein kinase D6PK-like 304 389 - -
Stsc60743g00008 698 FunFam serine/threonine-protein kinase D6PK-like 390 457 - -
Stsc60743g00008 698 MobiDBLite consensus disorder prediction 200 280 - -
Stsc60743g00008 698 Gene3D Transferase(Phosphotransferase) domain 1 531 656 - -
Stsc60743g00008 698 ProSiteProfiles Protein kinase domain profile. 306 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60743g00008 698 Pfam Protein kinase domain 535 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60743g00008 698 Pfam Protein kinase domain 307 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60743g00008 698 CDD STKc_phototropin_like 304 657 - -
Stsc60743g00008 698 Gene3D Transferase(Phosphotransferase) domain 1 386 454 - -
Stsc60743g00008 698 Gene3D Phosphorylase Kinase; domain 1 304 385 - -
Stsc60743g00008 698 MobiDBLite consensus disorder prediction 1 67 - -
Stsc60743g00008 698 SMART serkin_6 306 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60743g00008 698 MobiDBLite consensus disorder prediction 78 94 - -
Stsc60743g00008 698 SUPERFAMILY Protein kinase-like (PK-like) 282 660 IPR011009 -
Stsc60743g00008 698 MobiDBLite consensus disorder prediction 1 178 - -
Stsc60743g00008 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Stsc60743g00008 698 PANTHER FLIPPASE KINASE 1-RELATED 71 663 - -
Stsc60743g00008 698 FunFam serine/threonine-protein kinase D6PK-like 533 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60743g00008 Stsc-Chr60743 26743 29552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60743g00008 170 698 AGC Kinase Gene Family AT3G52890 66.606 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc60743g00008 Pkinase 3.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60743g00008 - K08286 gmx:100813470 1031.17