Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60743g00001 ATGGATGAAACTCAGAGCAAGAAGAAGAAGAACCACGACAGCAAGCAAAAACAATTCTTCTTACACGAGCTTCTCAGCGAAGATCAAGAGCCATTCCTTCTCACCAATTACATCTCCGACAAGCAAAACCAACTCACCATTAAGAAGCACTCGCAAACCCTAAAAACCTCATCTTTATTCCCAATTCATCACCTCTGCAAGAACGCGCTTTGCTTCAATTCTTCTTCTTCAGCTCCAACAACCACACCTGACTTCACCAAATCGCCGCTATTCAGAATCAGTCCGTGCTCTGCACGTGCTTCTTCTTCGCCGAACGCCATGTTCCTTCACGTTCCCGCGAGAACAGCTTCCATTCTTCTAGAAGCTGCGATTCGGATTCAGAATTACTCCAATTCCAGAAACATCAACAACAATGGAGGTGGATTCGGCTTCTTTGGTTCCTTCTTCAGGAGATTCACGCAGAGGGGAAGAAGGAACAAGAGACAAATACAACAGAATAATAATAATCATGATGATGATAACAATGTGAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGGATCTCTTGAAATTCGAGCTAGATTCGGGAGGAAGAACAATGGAAGAAGATGAGAAGAAGAAGAAGAAGGGGAATGTTATGGTGGACACTAGTGCGGTGGGGTTCAGGTGTTCCTGCAGTGAAGAAAGGGTGTGTTCTTCTTCGAGTAATGCTGATTTTTGTTGCTTTGTTGATGATGATAATGATTTATTCTTTGAAAGCCCTTTCCGTTTTGTCCTCCAACGGAGCCCCTCCGGCCGCCGTACGCCGGAGTTCTCCTCGCCGGCATCGTCTCCAAATCGCCTCAGAACAGAGGACAAAGAAGATAATAATAATAATAATAACAATAATGGAGATGATGATAGCATCAACAAATTCCAATCAGTGAAGCAAAAAGAAGAAGAGGACGAAGAAGAAGATAAAGAACAATGTAGTCCTGTTTCAGTTTTAGACCCACCATTTGAGGATGATGATGATGTTCATGAAAGCAATGATGATGATGGGGAAGGTTTTGATTTGGATTGTAGCTACGCCAATGTGCAAAGAACGAAGCAACAACTATTATACCGGCTAAGTAGATTCGAGAAATTGGCGGAGTTAGACCCATTGGAACTCGAACAAAGAATGTTAGATCAAGAAAACGAGGATATTCGTGAAGATGGCGATAGTGAATCATCGCGTGAAGAAGAAGACTTGAGAGAAATAGTTTATGCAATCCTCAACCAATCAAGCCGATGGCGAGTTCCAGAGGATCTCAAGAGACTAGTTTATGATCTCATGATGGAGGAAGAAGAGATCACGGAACTCGATTCCCCAAAAGACAAGGAGATGGTGATAAAAAGGGTTTGTAAGAGGTTGGAGCTATGGAAGGAAGTGGAATCCAACACCATTGATATGATGATTGATGAGGACTTCTCAAGAGAGGAAATTGGGTGGAAGAAAAATTCACAACAGGTAAGAGACTTGGCTGGAGAACTTGAGCTTGCCATCTTTGCCCTTTTAGTGGAGGAATTTTCAGAGGAACTTGCTATTTAA 1581 0.4257 MDETQSKKKKNHDSKQKQFFLHELLSEDQEPFLLTNYISDKQNQLTIKKHSQTLKTSSLFPIHHLCKNALCFNSSSSAPTTTPDFTKSPLFRISPCSARASSSPNAMFLHVPARTASILLEAAIRIQNYSNSRNINNNGGGFGFFGSFFRRFTQRGRRNKRQIQQNNNNHDDDNNVKWKKKKKKKKKVKDLLKFELDSGGRTMEEDEKKKKKGNVMVDTSAVGFRCSCSEERVCSSSSNADFCCFVDDDNDLFFESPFRFVLQRSPSGRRTPEFSSPASSPNRLRTEDKEDNNNNNNNNGDDDSINKFQSVKQKEEEDEEEDKEQCSPVSVLDPPFEDDDDVHESNDDDGEGFDLDCSYANVQRTKQQLLYRLSRFEKLAELDPLELEQRMLDQENEDIREDGDSESSREEEDLREIVYAILNQSSRWRVPEDLKRLVYDLMMEEEEITELDSPKDKEMVIKRVCKRLELWKEVESNTIDMMIDEDFSREEIGWKKNSQQVRDLAGELELAIFALLVEEFSEELAI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60743g00001 526 MobiDBLite consensus disorder prediction 334 354 - -
Stsc60743g00001 526 MobiDBLite consensus disorder prediction 164 178 - -
Stsc60743g00001 526 MobiDBLite consensus disorder prediction 265 354 - -
Stsc60743g00001 526 PANTHER OS04G0572500 PROTEIN 17 524 - -
Stsc60743g00001 526 MobiDBLite consensus disorder prediction 156 180 - -
Stsc60743g00001 526 MobiDBLite consensus disorder prediction 268 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60743g00001 Stsc-Chr60743 3579 7874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60743g00001 15 525 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 30.686 3.35e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60743g00001 - - ahf:112728865 655.21