Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60741g00007 ATGGACCATCCATCTGATCAAGAAGAATCGATTCGAGGGAATAGGTTTGAATTTGGACAATTTGTTGCGCGGGAAGCTGTGCTTGATGAAGAATATTGGACAGCAGCATGGCTCAGAGCAGAATGTCAATGGGAGAATAGAATGTATGAAAGATATATTGATAACTTCAAAAGAAAATTCGCTGAGCAGGAATTTACTGCAGTAAGAAGGCGGTGCAAGGTTCGAAACGGGGAAACTTGCACATGCATTATCACGGTAAGGAAGGAACCCAGCAATTCAAAACATTCAGTATTAAATAGTGTTGTGGGAACCCTTGATTTGAATATTCGCTATTTGCTGCAAGGAGAGACCTTTCCAGGGGAACATGTGAAGGCTCCGCTTTTTTGTAGCATCAACAGAACGCCGCCGAGCAGATACGGCTACATTGCAAACTTATGCGTCGCGAAATCAGCTCGCCAACAGGGAATTGCAAGCAACATGTTGTATTTTGCTATTGAAGCTGCCAAATATAATGGGGTGACACAAATATATGTTCATGTTGATAGAAATAATAGGCCTGCACAGATGTTATACCAGAAGATGGGCTTCCAGATGGTTGAGACAGCAAACGCCAAATTGTCGCTAGAGGAAACGTTCTTGCTACGATTGCAGACTTAA 657 0.4262 MDHPSDQEESIRGNRFEFGQFVAREAVLDEEYWTAAWLRAECQWENRMYERYIDNFKRKFAEQEFTAVRRRCKVRNGETCTCIITVRKEPSNSKHSVLNSVVGTLDLNIRYLLQGETFPGEHVKAPLFCSINRTPPSRYGYIANLCVAKSARQQGIASNMLYFAIEAAKYNGVTQIYVHVDRNNRPAQMLYQKMGFQMVETANAKLSLEETFLLRLQT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60741g00007 218 CDD NAT_SF 128 179 - -
Stsc60741g00007 218 Pfam Acetyltransferase (GNAT) family 52 196 IPR000182 GO:0016747
Stsc60741g00007 218 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 217 - -
Stsc60741g00007 218 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 135 201 IPR016181 -
Stsc60741g00007 218 Gene3D - 30 210 - -
Stsc60741g00007 218 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 128 215 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60741g00007 Stsc-Chr60741 42354 44715 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc60741g00007 Acetyltransf_1 2e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60741g00007 - - gmx:100795426 357.066