Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60738g00001 | ATGGCGAGTAGGCTGAAGGAAGACGAGAAGAACGAGCGGGTAATTCGCGGTCTTCTTAAGCTTGAACCGAATCGAAGATGCATTAACTGCAACAGCTTGGGACCACAATATGTCTGCACAAATTTCTGGACATTTGTTTGCACAAACTGTAGTGGAATACACCGGGAATTCACCCACAGGGTTAAATCAATTTCAATGGCTAAATTTACTTCCCAAGAAGTTAATGCTCTTCAAGCAGGGGGAAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCACAACGTAATTCTTTCCCTGATAGCAGTAATGTTGATCGGCTCCGGGACTTTATTAAGCATGTTTATGTGGATAGAAGATTTAGTGGAGAGAGGGCTAATGACAAACCACCAAGAGGAAAGGGTGACAATGATATGTATCAAGGAGGGTCTAGAAGCCCCCCGCAATATGGTGACTATGGGAGAAGTCCTGGTCGTCCTCCAATAGTCAATGATTGGCGACGTGAAGATCGTAGAGTATCTGATGGGGATTATAAGGTAGAAAATCAATCTCCTGATCGAGCCAGAGATGTTGGTTCTTCCAGTCCACCTGTGGTCCGGCCTGTTAGAGAGATATTGGGAGAAAATGTAGTACCTCTTCGGATAAGTGAACCACCCAAACCAAACAGTGGAAGAGCTGCAGATGGCTCTGCATTGACACAGAGAACCGCATCTTCCAGTAGCTTGGCGTCCAGCAATGGGAATCCAGTGGATGTTAAGCCTGAGATTACAAAGAGCCTTATTGATTTCGATGCTGATCCTGAACCTCCTGTTGCTCCAGCGATTTCTCCTGCCCAACAAACTACTGCTCCTCAACCTGTTATGCAGCCAGAAAATTCCAGGGCTGATAATTGGGCCTCTTTTGATGTTGCTCCTCAAGCTACAGCAAATTCTAATCCAAGCCCGGTGAATGTAAATCCACTTGAATCTGTGTTGTCCCAATTGTCAGTGCCAGCTTCTTTACCTTCTCATGTTTCTGGAGTCCAAGCTGGTCCATATGTTGCAACAGCCATTCCTGTGGTTGATGTGACAACACCTGCAAGTGTCGGCGGTTTCTCAGCTTTCCCACAGAGTGGTTCTTCAGGACCTTCTCCTGGACCAGCAACAGCACCGCCTCCTAATAATGCAGGACAGTGGGCCGGTATGCAGCATCAGCAACCATTGTTCCAAGCTAATGCTACTCAGTCCACACAACAATTTACACCACCTGTAGGTGGAGCTGTAAGCAATCAGCCATGGAATATATCTTCTGTACCTACAGTTCAAGGGCATCCAAATACAGCAATCCCACATGCATCCCATGATGCTATAAATCCTGTCAATACAACCAGTGTTGTTTCACAACCTTCCACTGAAGTGAAACCAAGTGGAAGAAAAGAACTTCCTGAGGACCTATTCACTATAAAATACCCATCCTACCCTGCACCGGTTCCTGGTTGGCAAATGGGTCTTCCCCATGGCATGGGTCTTCCCCGTGGCATGGGTATCTCAGTGCAATATAATAACATGGTGGCTATGCCAAGTTTTCCGCAGCAATCAAAATCTGTCAATCCATTTGATGCTGGCGGTGAATCTCCCCAAGTTCAAGTGCCAACTTTTCCTTCCATGTCATCTTTGCATGGTGCTCTGCCCAGTATGCCACCTTCAGGAGCAATTCATCCTTCAAGCCTGGGTAATCCATCTCATAACTGGACTCCACCCCCGTCATCATCATACGTATCTGTCCTGCCTGGACAAGCACAAACTCATCCATCAGCTATGGGACCAAGGACTTACATGGTACAACAAATGCCACCACCTAACATGGCAATGCCAAGGCCAGAAGCTAGTAGTTTTGGAGCTGGAGGAGCTGTTTTCGGCTTGTCAAATCCAGAACAGCAGCTAACTAATTCATTCTCCACCACTCCTGCCCCTAATGCCTTCCCAGCAGGCGGGAACCCATTTGGCTGA | 1992 | 0.4674 | MASRLKEDEKNERVIRGLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVNALQAGGNQRAKEIYFKEWDAQRNSFPDSSNVDRLRDFIKHVYVDRRFSGERANDKPPRGKGDNDMYQGGSRSPPQYGDYGRSPGRPPIVNDWRREDRRVSDGDYKVENQSPDRARDVGSSSPPVVRPVREILGENVVPLRISEPPKPNSGRAADGSALTQRTASSSSLASSNGNPVDVKPEITKSLIDFDADPEPPVAPAISPAQQTTAPQPVMQPENSRADNWASFDVAPQATANSNPSPVNVNPLESVLSQLSVPASLPSHVSGVQAGPYVATAIPVVDVTTPASVGGFSAFPQSGSSGPSPGPATAPPPNNAGQWAGMQHQQPLFQANATQSTQQFTPPVGGAVSNQPWNISSVPTVQGHPNTAIPHASHDAINPVNTTSVVSQPSTEVKPSGRKELPEDLFTIKYPSYPAPVPGWQMGLPHGMGLPRGMGISVQYNNMVAMPSFPQQSKSVNPFDAGGESPQVQVPTFPSMSSLHGALPSMPPSGAIHPSSLGNPSHNWTPPPSSSYVSVLPGQAQTHPSAMGPRTYMVQQMPPPNMAMPRPEASSFGAGGAVFGLSNPEQQLTNSFSTTPAPNAFPAGGNPFG | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60738g00001 | 663 | PANTHER | ARFGAP/RECO-RELATED | 1 | 663 | IPR044820 | GO:0005096 | |
Stsc60738g00001 | 663 | FunFam | Arf-GAP domain and FG repeat-containing protein 1 | 1 | 134 | - | - | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 163 | 187 | - | - | |
Stsc60738g00001 | 663 | SMART | arf_gap_3 | 12 | 130 | IPR001164 | GO:0005096 | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 640 | 654 | - | - | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 228 | 253 | - | - | |
Stsc60738g00001 | 663 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 11 | 123 | IPR037278 | - | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 276 | 294 | - | - | |
Stsc60738g00001 | 663 | Pfam | Putative GTPase activating protein for Arf | 13 | 123 | IPR001164 | GO:0005096 | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 368 | 394 | - | - | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 123 | 294 | - | - | |
Stsc60738g00001 | 663 | PRINTS | HIV Rev interacting protein signature | 24 | 43 | IPR001164 | GO:0005096 | |
Stsc60738g00001 | 663 | PRINTS | HIV Rev interacting protein signature | 43 | 60 | IPR001164 | GO:0005096 | |
Stsc60738g00001 | 663 | PRINTS | HIV Rev interacting protein signature | 61 | 82 | IPR001164 | GO:0005096 | |
Stsc60738g00001 | 663 | Gene3D | Arf GTPase activating protein | 2 | 131 | IPR038508 | - | |
Stsc60738g00001 | 663 | CDD | ArfGap_AGFG | 12 | 122 | - | - | |
Stsc60738g00001 | 663 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 12 | 130 | IPR001164 | GO:0005096 | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 640 | 663 | - | - | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 563 | 600 | - | - | |
Stsc60738g00001 | 663 | MobiDBLite | consensus disorder prediction | 566 | 600 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60738g00001 | Stsc-Chr60738 | 711 | 7930 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60738g00001 | 12 | 122 | C2H2 Transcription Factor Family | AT4G21160 | 29.839 | 4.69e-11 | 62.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60738g00001 | - | - | gmx:102669541 | 863.603 |