LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60737g00001	ATGGAAAGTTCCAAGAACAATCGAGTGGAGAAGAGAGGGTATGACTTGGTTGAAGAGAGTGATGATGATCGTTTAACACAGCCAAAGAAGCCTAAACTACCTGGTTTAGCAAGTGTGATTGTGGAAGCTTTGAAGGTGGATAGTCTGCAGAGACTTTGCTCATCTCTGGAACCTCTACTCAGAAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGCCCTGCTAAACTGGCTGAAAGATCTCTGCAACCAAGAATTGAAGGCCCAGAGGCAAAGAATCTGCAGCTGCATTTCCGAACAAGAATGCCACCTCACTTGTTCACTGGTGGGAAGGTTGATGGAGAGCAAGGAGCAGCCATCCATGTTGTGCTGCTAGATCCGAACACGGGAAATGTGGTTCAAGTTGGACCGGAATCCGTCGCCAAGTTGAACATTGTGGTGCTTGAGGGTGACTTTAATGAGGAAAGTGATGATGAATGGACAAAAGAGGACTTTGAAAGCCACGAAGTGAAGGAACGAGAAGGGAAAAGGCCACTTCTGACTGGAGATTTACATGTTAGTCTAAAGGAAGGAGTAGGAACCTTAGGTGATCTTACTTTTACTGACAATTCTAGCTGGATTAGAAGTAGAAAATTCAGGCTTGGTGTTAAAGTAGCTCCTGGGTATTGTGAGGGAATTCGTGTTCGCGAGGGAAAGACTGAAGCCTTTGCTGTTAAAGATCATCGAGGAGAATTGTACAAGAAACACTATCCACCTGCTTTGCATGATGAAGTTTGGCGACTGGATCGGATAGCTAAGGACGGTGCACTTCACAAGAAATTGATTCAAGCAAAAATAGTTACCGTAGAAGATTTCCTGCGTCTTCTTGTTCGGGACCCACAGAGGTTAAGAAGCATACTCGGAAGCGGAATGTCGAATCGGATGTGGGAGAACACTGTGGAGCATGCCAAGACATGTGTCTTGGGTGGTAAGCTTTTTGTGTACTACACTGATGAAACCAATAGCACTGGCATTGTGTTCAACCACATATATGAGCTGAGAGGCCTCATTGCTGAGGGGCAATTCTGCACTTTGGAATCACTTACTCCAAATCAGAAGATGTCTGTGGATTCTTTGGTGAAGAAAGCATATGACAATTGGAAGCACGTTATAGAATATGATGGAAAAGTCTTAAATTCTCTTACAAATTCCAGAAAGGGATCAAGATCTGTATCTACTATAGTTCATCATAATGATGTCACAGGGCAGCAGCCATGCACATCTGCGAAGAACAGGCTGCCATATGCATCATCTTTACAAAACCAACCTTTGCAAATAACGAATAACTACTCGGCAAGTTCTGATTTAACTGATTACCAATTTGAGAGATCCAATAATGAGATGGTAGGGACATCAGTAAATAACTCCCAACTCGCATTTTCGGCCGGCATGAGCTACCTACCGTCCGAAAATCCTGAAGTTGAGGGTACATATTTCTCGGCAGATTGGTCTCGGCCGAGAAATTCGCAAGGACTGGAAGACATTGTCGCCGAAGAACTCCGTCTTAGGAGTTCAGAGATGTTGGAGAGTGATGACATGCAGAGGTTGCTAAAGACTATTAATGCTGGAGTCAGTATGTCAGCCAATTTCGGTCATTCTAATGAAGGTTCATACACCTACAGTCTGCAATATGAGCCTCAAATGTATCATTCGTTCGCGGAGGATCAGGGAAAGTCATCTGGTAAAGCTGTTGTTGGGTGGCTTAAGCTCAAAGCAGCATTGAGATGGGGCATATTTATCAGAAAAAAAGCTGCTGAAAGGAGAGCACAGCTCACTGAGTTAAATTGA	1836	0.4401	MESSKNNRVEKRGYDLVEESDDDRLTQPKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKLGPAKLAERSLQPRIEGPEAKNLQLHFRTRMPPHLFTGGKVDGEQGAAIHVVLLDPNTGNVVQVGPESVAKLNIVVLEGDFNEESDDEWTKEDFESHEVKEREGKRPLLTGDLHVSLKEGVGTLGDLTFTDNSSWIRSRKFRLGVKVAPGYCEGIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKIVTVEDFLRLLVRDPQRLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVYYTDETNSTGIVFNHIYELRGLIAEGQFCTLESLTPNQKMSVDSLVKKAYDNWKHVIEYDGKVLNSLTNSRKGSRSVSTIVHHNDVTGQQPCTSAKNRLPYASSLQNQPLQITNNYSASSDLTDYQFERSNNEMVGTSVNNSQLAFSAGMSYLPSENPEVEGTYFSADWSRPRNSQGLEDIVAEELRLRSSEMLESDDMQRLLKTINAGVSMSANFGHSNEGSYTYSLQYEPQMYHSFAEDQGKSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60737g00001	611	MobiDBLite	consensus disorder prediction	1	29	-	-
	Stsc60737g00001	611	MobiDBLite	consensus disorder prediction	1	31	-	-
	Stsc60737g00001	611	PANTHER	OS02G0177800 PROTEIN	10	529	IPR012416	GO:0005516
	Stsc60737g00001	611	Pfam	Calmodulin binding protein central domain	256	322	IPR046830	-
	Stsc60737g00001	611	Pfam	Calmodulin binding protein C-terminal domain	327	389	IPR046829	-
	Stsc60737g00001	611	Pfam	Calmodulin binding protein-like N-terminal domain	97	244	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60737g00001	Stsc-Chr60737	31496	36869	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60737g00001	1	611	Calmodulin-binding Proteins	AT2G24300	62.419	0.0	742

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60737g00001	-		-	gmx:100775528	1018.45