Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60731g00009 ATGAGAAGCCTTGTGTCACTTTTTGTGTCTTCTCTTTTTGCTTCATTCTTATCAAGCTTCTCAGCTCTAGACATTCTTACTACACATGAACTGATAAGAGATGGTGACAAGTTAGTTTCAGCAGGAGGGACCTTTGAACTGGGATTCTTCAGCCCTGGTAAATCAAAAAACCGATATTTGGGAATATGGTATGTGGCCTCACCTAGAACTCCTATATGGGTAGCAAATAGAGAAGCTCCCATTAGAGATGGTTCAGGAATTCTCAGGATCACTGAGGGGGGTATCCTTAACCTTACTAACATCACAGGTAATATTGTTTGGTCTTCAAATGCATCTGCAGCTGCAGAAAATGCATTTGCACAACTTCTGGAATCAGGGAATCTTGTGGTGCGAGACCCTAATGCTAGAACCACAGAATCCTATTTGTGGCAGAGTTTTGATTATCCTTGTGACACATATATGCCTGGCATGAAGATTGGGAAGAACCTAGTTACTGGTTTGGAAACATTCATAACATCTTGGAAGAGTGGAGATGACCCTGCCCCTGGTAAGTACTCACTTTATCTTGATACTCATGGTTGGCCACAGGTGTTTATCAGAAAAGGAATCACTGTAGTGTCACGATTTGGATCATGGAATGGTCTTGGGTTGACTGGAGATCCAGGGAGGCCAGAAGGATCATTGGTCTTTGTATTCACATACAGTGAAAGCGAGGTTTATGTGGGTTACCAACTCAAAAACGGTTCTGCTTTGTCAAGAGATGTACTGCATCCATCAGGCGACATGCAGCGACTCATATGGATAAATGGGATTCAGAATTGGGCAGTCTCCTCAACACTTCTGTCAAATCCGTGCCAAATTTATGCATGGTGTGGTGCTTATAGCGTCTGCAATACCATTAACTTTCCTGTGTGTGAATGCTTGACAGGGTTCAGTCCTAAGTCTCCAAAAGATTGGAATAATGGGAACTGGTTTACTGGATGTGATCGGAGGACGAAATTGAATTGCCATGATGATGGCTTCTTGAGGTACATAGGAGTTAAATTGCCTAATACGTCCTCTTCATTTTTCAATGAAACCATGAATCTTCAAGAATGTGGTCAATTGTGCTTAAGTAAATGCTCATGTACTGCATATGCAAACTTATATGTTGATGGAAGTGGTTGCTTGCTTTGGTTTGCTGATCTTGTGGATATAATCGAATATAGCAAGGGCGGTCAAGACCTTTATGTAAGGGTAGCTGCTTCAGACATTGGTGGTGTAGAGAAAATGGGGAGATCCAACAAAAAGGAAAAACTAGCGGCTATCATAGTTGGAAGTGGGGTTTTATTCATGTTTGTCATCCTCTTTCTGGGATGCTTAACCTATAAACAAAGGGACAGCAGAATAAAGAGAGATTTTGGAATGGCAGAGAAAGTTTATGGCTGGGATTACAGATATGGACAAAGACAGGAAGATGTGGACTTGCCAACATTTGATTTCCAAACAATAGCTAATGCAACAGGCAACTTTTCTAGTGATAACAAGGTGGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGCACATTAATTGATGGACAAGAGATAGCTGTGAAGAGGCTGTCCGTGAATTCTTGCCAAGGACTAAATGAATTGAAAAATGAAATTAATATAATCATTGCTAAGCTTCAGCACCGTAATCTTGTCAAGCTATTTGGTTGTTGTCTTGAGGAGGAAGAGAAAATTTTAGTATATGAATATGTGCCTAACAAAAGCTTGGACTCCTTTATATTTGACCAAACAAGAAGCAAATTACTGGATTGGCCGACTCGTATGCATATTATTGTTGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGACTCCAGAATGAGGATTGTTCACAGAGATCTCAAAGCTAGCAATATTCTTCTAGATGCCAATTTGAATCCAAAAATCTCAGACTTCGGGCTTGCGAAGGCCTTTGGAGGAGATCAAACTGAGGCGAGAACAAATCGGATAGTTGGGACACATGGTTATATGCCTCCTGAGTATGCTGTGCATGGGAAAGTTTCTGTTAAGTCAGATGTCTTTAGCTTTGGAGTTTTGGCACTAGAGATACTAAGCGGCAAGAAGAATAGAGATTTCAGCGACCCGTATCATAACCTTAATCTTCTTGGACATAGCTGGAGATTGTGGGTTGAGAAGAGACACTTGCAACTGATTGATTATTCATTAAGAAGCACCGCTGATGCAACTGAGATAATGAGATGCATACATATTGCGCTATTATGCGTGCAACAAAGTCCAGAAGACAGGCCAGACATGTTATCGGTGGTTGTAATGTTAACTAGCGATAGCAACTTGCCGAATCCAAAACAGCCTGCATTTTATGTGGAAAGGAATTGTCACGGTAAAGGCCTTGTAGAAGTTAATCAAAAAACATATTCTGAAAATGAAGTGACAATCTCATTGGTAGAAGCAAGGTAG 2469 0.4103 MRSLVSLFVSSLFASFLSSFSALDILTTHELIRDGDKLVSAGGTFELGFFSPGKSKNRYLGIWYVASPRTPIWVANREAPIRDGSGILRITEGGILNLTNITGNIVWSSNASAAAENAFAQLLESGNLVVRDPNARTTESYLWQSFDYPCDTYMPGMKIGKNLVTGLETFITSWKSGDDPAPGKYSLYLDTHGWPQVFIRKGITVVSRFGSWNGLGLTGDPGRPEGSLVFVFTYSESEVYVGYQLKNGSALSRDVLHPSGDMQRLIWINGIQNWAVSSTLLSNPCQIYAWCGAYSVCNTINFPVCECLTGFSPKSPKDWNNGNWFTGCDRRTKLNCHDDGFLRYIGVKLPNTSSSFFNETMNLQECGQLCLSKCSCTAYANLYVDGSGCLLWFADLVDIIEYSKGGQDLYVRVAASDIGGVEKMGRSNKKEKLAAIIVGSGVLFMFVILFLGCLTYKQRDSRIKRDFGMAEKVYGWDYRYGQRQEDVDLPTFDFQTIANATGNFSSDNKVGEGGFGPVYKGTLIDGQEIAVKRLSVNSCQGLNELKNEINIIIAKLQHRNLVKLFGCCLEEEEKILVYEYVPNKSLDSFIFDQTRSKLLDWPTRMHIIVGIARGLLYLHQDSRMRIVHRDLKASNILLDANLNPKISDFGLAKAFGGDQTEARTNRIVGTHGYMPPEYAVHGKVSVKSDVFSFGVLALEILSGKKNRDFSDPYHNLNLLGHSWRLWVEKRHLQLIDYSLRSTADATEIMRCIHIALLCVQQSPEDRPDMLSVVVMLTSDSNLPNPKQPAFYVERNCHGKGLVEVNQKTYSENEVTISLVEAR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60731g00009 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Stsc60731g00009 822 ProSiteProfiles PAN/Apple domain profile. 336 414 IPR003609 -
Stsc60731g00009 822 Gene3D Transferase(Phosphotransferase) domain 1 581 788 - -
Stsc60731g00009 822 Pfam PAN-like domain 336 399 IPR003609 -
Stsc60731g00009 822 CDD PAN_AP_plant 332 414 - -
Stsc60731g00009 822 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Stsc60731g00009 822 PIRSF SRK 1 822 IPR024171 GO:0004674
Stsc60731g00009 822 SMART blect_4 29 149 IPR001480 -
Stsc60731g00009 822 SMART serkin_6 504 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60731g00009 822 Gene3D - 19 146 IPR036426 -
Stsc60731g00009 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Stsc60731g00009 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 784 - -
Stsc60731g00009 822 CDD B_lectin 30 149 IPR001480 -
Stsc60731g00009 822 Gene3D Phosphorylase Kinase; domain 1 478 580 - -
Stsc60731g00009 822 Pfam Protein tyrosine and serine/threonine kinase 507 774 IPR001245 GO:0004672|GO:0006468
Stsc60731g00009 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 580 - -
Stsc60731g00009 822 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 767 - -
Stsc60731g00009 822 Pfam Domain of unknown function (DUF3403) 777 822 IPR021820 GO:0004674
Stsc60731g00009 822 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Stsc60731g00009 822 Pfam D-mannose binding lectin 70 175 IPR001480 -
Stsc60731g00009 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 146 - -
Stsc60731g00009 822 SMART ntp_6 336 413 IPR003609 -
Stsc60731g00009 822 CDD STKc_IRAK 510 777 - -
Stsc60731g00009 822 SUPERFAMILY Protein kinase-like (PK-like) 487 787 IPR011009 -
Stsc60731g00009 822 ProSiteProfiles Protein kinase domain profile. 504 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60731g00009 Stsc-Chr60731 21012 24791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60731g00009 446 793 Receptor kinase-like Gene Family AT4G23140 52.394 3.79e-119 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60731g00009 PK_Tyr_Ser-Thr 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60731g00009 - - ahf:112707324 1388.24