Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60731g00007 ATGTTAGATGATGGTAGAAGAGAATTATTAGATTGGACTAAGCGCTTCCAAATTATTAGTGGGATAGCTCGAGGACTAATTTATCTACATCATGACTCAAGGCTGAGAATCATTCATAGAGATCTTAAAACGAGCAATATTCTTCTTGATCATGATATGAACCCAAAAATATCGGACTTCGGTCTTGCAAGAATATTTGGGGGAGATCAAACTGTGGCCAATACAAGGAGAGTCATGGGAACTCATGGTTATATCTCTCCTGAGTACGCAATGCATGGCTCTTTCTCGATGAAATCTGATGTGTTTAGCTTTGGTGTAATTATACTCGAGGTAGTTAGTGGGATGAAGAACAGGGAACTCCCTATCTCTCACCAATTTCTTAATCTTCTTGGACATGCATGGGAATTGTGGAGTAAGGAGATGGCTATGGAGCTGGTGGATAAATCGCTTGGTGATTCAATCATGGAAGTTCAAGTGTTGAGATGCATTCAGATTGGGCTTTTGTGTGTGCAAGAGAGACCAGAAAACAGGCCTAACATGTCATCAGTAATCCATATGCTCAATGGTGATAAATCACTACCTAAGCCAAGGCAACCAGCATTTTATCCACACCAAGAAAGTAGTTCTTCAACTAAAAACTGTGAAATTTGTTCAAATAATGATATTTCCATCACACTGTTGGAGGCCAGATAG 693 0.3968 MLDDGRRELLDWTKRFQIISGIARGLIYLHHDSRLRIIHRDLKTSNILLDHDMNPKISDFGLARIFGGDQTVANTRRVMGTHGYISPEYAMHGSFSMKSDVFSFGVIILEVVSGMKNRELPISHQFLNLLGHAWELWSKEMAMELVDKSLGDSIMEVQVLRCIQIGLLCVQERPENRPNMSSVIHMLNGDKSLPKPRQPAFYPHQESSSSTKNCEICSNNDISITLLEAR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60731g00007 230 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 195 - -
Stsc60731g00007 230 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 230 - -
Stsc60731g00007 230 Pfam Protein tyrosine and serine/threonine kinase 7 187 IPR001245 GO:0004672|GO:0006468
Stsc60731g00007 230 Gene3D Transferase(Phosphotransferase) domain 1 1 199 - -
Stsc60731g00007 230 SMART serkin_6 2 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60731g00007 230 SUPERFAMILY Protein kinase-like (PK-like) 6 210 IPR011009 -
Stsc60731g00007 230 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60731g00007 230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60731g00007 Stsc-Chr60731 16815 17907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60731g00007 10 222 Receptor kinase-like Gene Family AT4G23280 54.884 7.36e-83 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60731g00007 PK_Tyr_Ser-Thr 1.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60731g00007 - - gmx:106794307 326.635