Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60731g00006 ATGCAGAACTTGAAGGTGCTACTATGGTTTTGGTCTTTTCTATTCTCACTTATATTAAGAATCTCCACTTCACTGGATAGTATAGCCCCAACTCAGTCCATCGGTGACGGAGAGTCATTAATTTCGCGCGGAGGAACCTTTGAAGTTGGCTTCTTTAAGCCAGAAAACTCAAATAGCCGATACTTAGGCATATGGTATTATAATGTGTCTCCTTTAACAGTAGTATGGGTGGCCAATAGAGAAAAACCACTCAACAACACATCTGGTATTCTAAGAGTCACTGATCAAGGACTTGTCCTTGTTAATGGCAGCACCAACAGCACTGTGTGGTCCTCCAACATGCTAAGAAAACCAGAGAACCAGAATCCATTTGCACAGATCTTGGACTCAGGAAACCTTGTTCTTAAAGATGGACATAATGAGGAGGAAATTCTGTGGCAGAGCTTTGATTATCCCGGTGACACATTCTTGCCAGGAATGAAACTTGGATTGGATCTTGTGACAGGCCTAGAGAGGTCTGTATCGTCGTGGAAGAGCACGGATGATCCTGGCCATGGATACTATGAAACTAAACTAGACCGTAGAGGCTATCCACAAGTGGTCATAACAAATGGAACCGCTACAATGATTAGATTAGGGCCATGGACTGGTCTTACTTTCTCAGGGTCCACACTTTACTTGCGCTACACTCAACTGTCAAATGAATTTGTGTTCAATGAGAAAGAGATATTTTATGAGTACAATCTTTTGAATACATCTAATTTTGTGAGAATTGTGGTGACAACCTGGGGGAATCTTCAGTCTTTTCATTGGTTAAGACAAACCGGAAGCTGGGAAACTCTTCTTTCAATACCGGCGACACAATGTGACAAGTATGCAGTGTGTGGTGCAAATTCTATCTGCAGTGTCTTTAACACTGCATTTCCAACCTGCAAATGCCTGAACGGATTTGTACCAAAATACCCTGAAAAATGGGAGGAATCACATTGGTCTGATGGTTGTGTTAGGATCACTCCTTTGAGCTGCAGCAAAGATGGATTTAAGAAGCTTACAAACATGGTGTTGCCTGACACATCTTCTTCCTGGTATAACAAGACCATGAACTTGCAAGAATGTGAGGATTTGTGTCTGAAGAATTGTTCATGCACAGCGTATGCTAATTTGGATATCCGCGGAGGAGGAAGTGGGTGCTTAATTTGGTTTCATGATCTCATTGACATGAAAGAAGGGGTAAATGAATTTTATATCCGAACAACTATTTCAGAGCTAGATGATAATCAGAACAACAATTCCATCAAGAAGAAGCTAGCAGTAATCATCATTGGATCCGCATTGTTTATCATGTGCATAACACTTGGAATGGCAATCTATGTATGGAGAAACAAACTTGAGAAGCTAGAAATATTTTGTTGGAAGCAAAATTCTTGTGAAAGCGCAAACGAGGACATTGATCTTCCAAGCATTGATTTATCAACCATAGCTTCTGCCACTAATCACTTCTCCAGTGGAAACAAAGTAGGTGAAGGTGGATTTGGACCTGTGTACAAGGGTGTACTTGCCAATGGGGTAGAGATTGCTGTCAAGAGGCTTTCCAAGAATTCTCAGCAAGGGTTGCAGGAGTTTAAAACTGAAGTTCAGTTAATTGCTAAACTTCAGCATCGCAATCTTGTAAAGCTTCTTGGTTGTTGCATTCAGCAAAAAGAGAAGCTCTTGATTTATGAGTTCATGCCCAATAGGAGTTTGGACTACTTCATTTTTGATGGTTCTAGAAGAAAATTATTGGATTGGACCAAGCGATTTCAAATTATTAGTGGGACAGCTCGAGGCCTAGTCTATCTACATCAAGACTCTAGGCTAAGAGTCATTCATAGAGACTTGAAAACCAGCAATATTCTTCTTGATAAAGGTATGGACCCTAAGATATCAGACTTTGGCCTTGCTAGGACATTTGGAGGAGATCAAACTGTGGAAAACACAAAGAGAGTCATGGGAACTCATGGTTATATCTCTCCTGAGTATGCAGTGCATGGTTCTTTCTCAATGAAATCAGATGTGTTTAGCTTTGGTGTGATCGTGCTCGAGGTAGTGAGTGCTAGGAAGAACAGGGAATTCTCAATTCCACACCAAGATCTGAACCTTCTTGGATATGCATGGAAATTGTGGAGTGAAGAGAAGTCTCTTGAGCTGGTAGATGAATCACTTGGTGATTCAATTGTTGAAGATCAAGTATTGAGATGCATTCAGATAGGGCTTTTGTGTGTGCAAGAGAGACCAGAACACAGGCCTAACATGTCATCAGTAATCCATATGCTCAATGATGATAAACCACTTTCCAGGCCGAACCAGCCGGCGTTTTATCCACACCAGGAAAGCAGTTCTTCACCCATAAACAACGAAATGTTTTCAAGAAATGAGGCTTCCATCACATTGTTGGAGGCAAGATAG 2445 0.4119 MQNLKVLLWFWSFLFSLILRISTSLDSIAPTQSIGDGESLISRGGTFEVGFFKPENSNSRYLGIWYYNVSPLTVVWVANREKPLNNTSGILRVTDQGLVLVNGSTNSTVWSSNMLRKPENQNPFAQILDSGNLVLKDGHNEEEILWQSFDYPGDTFLPGMKLGLDLVTGLERSVSSWKSTDDPGHGYYETKLDRRGYPQVVITNGTATMIRLGPWTGLTFSGSTLYLRYTQLSNEFVFNEKEIFYEYNLLNTSNFVRIVVTTWGNLQSFHWLRQTGSWETLLSIPATQCDKYAVCGANSICSVFNTAFPTCKCLNGFVPKYPEKWEESHWSDGCVRITPLSCSKDGFKKLTNMVLPDTSSSWYNKTMNLQECEDLCLKNCSCTAYANLDIRGGGSGCLIWFHDLIDMKEGVNEFYIRTTISELDDNQNNNSIKKKLAVIIIGSALFIMCITLGMAIYVWRNKLEKLEIFCWKQNSCESANEDIDLPSIDLSTIASATNHFSSGNKVGEGGFGPVYKGVLANGVEIAVKRLSKNSQQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQKEKLLIYEFMPNRSLDYFIFDGSRRKLLDWTKRFQIISGTARGLVYLHQDSRLRVIHRDLKTSNILLDKGMDPKISDFGLARTFGGDQTVENTKRVMGTHGYISPEYAVHGSFSMKSDVFSFGVIVLEVVSARKNREFSIPHQDLNLLGYAWKLWSEEKSLELVDESLGDSIVEDQVLRCIQIGLLCVQERPEHRPNMSSVIHMLNDDKPLSRPNQPAFYPHQESSSSPINNEMFSRNEASITLLEAR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60731g00006 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Stsc60731g00006 814 Pfam Protein tyrosine and serine/threonine kinase 503 771 IPR001245 GO:0004672|GO:0006468
Stsc60731g00006 814 Gene3D - 20 149 IPR036426 -
Stsc60731g00006 814 Gene3D Transferase(Phosphotransferase) domain 1 576 782 - -
Stsc60731g00006 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 758 - -
Stsc60731g00006 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 575 - -
Stsc60731g00006 814 Gene3D Phosphorylase Kinase; domain 1 465 575 - -
Stsc60731g00006 814 CDD STKc_IRAK 506 772 - -
Stsc60731g00006 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Stsc60731g00006 814 SMART blect_4 31 152 IPR001480 -
Stsc60731g00006 814 Gene3D Hepatocyte Growth Factor 340 418 - -
Stsc60731g00006 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Stsc60731g00006 814 SUPERFAMILY Protein kinase-like (PK-like) 485 796 IPR011009 -
Stsc60731g00006 814 ProSiteProfiles Protein kinase domain profile. 500 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60731g00006 814 SMART ntp_6 342 419 IPR003609 -
Stsc60731g00006 814 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Stsc60731g00006 814 Pfam PAN-like domain 342 407 IPR003609 -
Stsc60731g00006 814 ProSiteProfiles PAN/Apple domain profile. 342 419 IPR003609 -
Stsc60731g00006 814 MobiDBLite consensus disorder prediction 784 799 - -
Stsc60731g00006 814 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Stsc60731g00006 814 CDD PAN_AP_plant 338 418 - -
Stsc60731g00006 814 Pfam D-mannose binding lectin 73 178 IPR001480 -
Stsc60731g00006 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 779 - -
Stsc60731g00006 814 CDD B_lectin 31 152 IPR001480 -
Stsc60731g00006 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Stsc60731g00006 814 SMART serkin_6 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60731g00006 814 MobiDBLite consensus disorder prediction 779 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60731g00006 Stsc-Chr60731 13058 16181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60731g00006 488 799 Receptor kinase-like Gene Family AT4G23140 54.545 1.96e-119 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60731g00006 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60731g00006 - - aip:107611884 1152.12