Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60726g00001 ATGCAGATTCAAGGGACTGACTCTTTGGTTCCAAAGTCGAGTAGATACAGTAGTCCTCTTGATTGTGCCCTTAAAACTGTGAAAAGTGAAGGGGTGACAGGAATTTTTCGCGGAGGTTTTACGACATTGCTTAGAGAATCAATAGGGAATGCTGTCTTTTTCAGCACATATGAATATGTGCGCTATCACTTGCATTCACATGCCAAAGCTGTTCCTTCCAATTACAACAACCTGGTTGATATTGGAATTGGGATTATTACTGGTGGTCTTGGTGGTGTGTCTTTTTGGTTGGCGGTTCTGCCCCTTGATGTGGCAAAGACTTTAATTCAGACAAACCCTGAAAGAAATGGTTCACGAAATCCTTTTCATGTCCTGAGTTCGGTTTACAGGAGCGGTGGCTTGAAAGGGTGTTATACAGGTCTGGGGCCAACAGTAACCCGAGCATTCCCTGCTAATGCAGCAGCAATTGTGACCTGGGAGCTAGCAATGAAAATGTTGGGCATTAGGCATGAGTGA 516 0.4438 MQIQGTDSLVPKSSRYSSPLDCALKTVKSEGVTGIFRGGFTTLLRESIGNAVFFSTYEYVRYHLHSHAKAVPSNYNNLVDIGIGIITGGLGGVSFWLAVLPLDVAKTLIQTNPERNGSRNPFHVLSSVYRSGGLKGCYTGLGPTVTRAFPANAAAIVTWELAMKMLGIRHE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60726g00001 171 Gene3D Mitochondrial carrier domain 1 170 IPR023395 -
Stsc60726g00001 171 ProSiteProfiles Solute carrier (Solcar) repeat profile. 79 165 IPR018108 -
Stsc60726g00001 171 Pfam Mitochondrial carrier protein 85 166 IPR018108 -
Stsc60726g00001 171 Pfam Mitochondrial carrier protein 1 65 IPR018108 -
Stsc60726g00001 171 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 166 - -
Stsc60726g00001 171 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 63 IPR018108 -
Stsc60726g00001 171 SUPERFAMILY Mitochondrial carrier 9 160 IPR023395 -
Stsc60726g00001 171 FunFam Mitochondrial amino acid carrier 46 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60726g00001 Stsc-Chr60726 1464 2950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60726g00001 17 166 Antiporters AT1G79900 32.468 1.02e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60726g00001 K15109 - gmx:100815087 278.485