Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60717g00008 ATGGCGGTTACAGGAGGAGGAGGAGGAAGAGGTTCTTCCATGGCGGCGGACATGAAGAACATAACCGTCCAAGTGATAACAGGACGGTGGTTCGTGGTGTTCGCCTCCTTCCTAATCATGTCAGCCTCAGGAGCCACCTACATGTTCGGCCTCTACTCCAACGACATCAAAACCTCCCTCGGCTACGACCAAACCACCCTCAACCTCCTCAGCTTCTTCAAGGACCTCGGCGCCAACTTGGGCGTCTTCTCCGGCCTCATCAACGAGTTCACCCCTCCCTGGGTCGTTCTCGCCATGGGCTCCCTCATGAACTTCTTCGGCTACTTCATGATCTGGCTCTCCGTCACTTCCAAGCTTCCCAAACCAAAACACTGGCAAATGTTCCTCTACATCTTCATCGGCGCCAACTCTCAGTCCTTCGCCAACACCGGCTCTCTCGTCACCTGCGTCAAGAACTTCCCTCGCACCCGCGGCATCGTCATCGGAATCTTGAAAGGCTACGTCGGATTAAGCGGCGCTATCATCACTCAGCTGTACTATGCTTTCTACTACGACGACTCCAAGGCCTTGATTCTTCTCATAGGGTGGCTCCCTGCTGCTATCTCCGTCATCTTCCTCCGAACTGTTCGATACATGAAGCCCGTTCATCAGCGCAACGAGATCGGTGTCTTCTACAAGTTCCTTTACATCTCCCTCGGCCTCGCCGGATTCCTTATGGTTATGATCATTGTTCAGAAGAACACCACTTTCAATCAGACAGAGTACGGTGCCAGCGCCGCCATGGTCCTCTTCCTTCTCTTCCTCCCTCTTGCTGTTCTCTTCGGCGAAGAGTTTAAGATCCGTCAGAATCAGAATCAGAAGCATTCCTCCGTTGATGATCCCTTACCGGAGGTGAAAGTAGTAGCGGCCGCCGCAGCCGAAGCAGAGAATAATAATAATCATCACATTAACAACAAATTAGTAGAAAGCAGATGGTGGGAAAATGTTTTGAGTCCACCGGAGAGAGGTGAAGACTATAACATACTCCAAGCTCTGTTCAGCATAGACATGTTGATATTGTTCTTCGCCGGAACATGCGGTTGCGGGGGAACGTTAACCGCAATCGACAACTTGGGCCAAATTGGAACCTCCCTTGGGTACCCAAAGAAAAGCATAAGCACGTTTGTGTCGCTAGTGAGTATATGGAACTATCTCGGACGAGTGTTTTCCGGGTTTGTTTCGGAACACATGCTGATAAAGTACAAATTCCCAAGACCTCTCATGTTCACCATGATTCTTCTTTTGTCTTGTGTTGGACACTTGCTAATAGCATTCAATGTGCCCAACAGTTTGTATGTGGCTTCTGTGATAATTGGATTCGGTTTTGGTGCCCAGTGGCCTTTGATTTTTGCCATTGTTTCGGAGGTGTTTGGGCTCAAGTACTATTCAACTCTGTATAACTTTGGAGGCATGGCGAGTCCGATTGGGTTGTATGTGCTGAATGTGAGGGTGACTGGGCATTTGTATGACAAAGAAGCTAAGAGGCAATTGGCGGCATCTGGGATCAAAAGACATGCTGGTCAGGAATTGAATTGTGTTGGGACCAGTTGCTACAAGCTGTCCTTTCTTATAATTGCTGCAGCTACTTTTGCTGGTGCTATTGTTTCGCTTATTCTGGTGGTTAGGACATACAGCTTCTATAAAGGTGACATTTACAAGAGGTACACGGTGGAGGAAGAGGAGGAGAAGAAGGAGGTGCGTGGCTGCGGTTCATGA 1755 0.4917 MAVTGGGGGRGSSMAADMKNITVQVITGRWFVVFASFLIMSASGATYMFGLYSNDIKTSLGYDQTTLNLLSFFKDLGANLGVFSGLINEFTPPWVVLAMGSLMNFFGYFMIWLSVTSKLPKPKHWQMFLYIFIGANSQSFANTGSLVTCVKNFPRTRGIVIGILKGYVGLSGAIITQLYYAFYYDDSKALILLIGWLPAAISVIFLRTVRYMKPVHQRNEIGVFYKFLYISLGLAGFLMVMIIVQKNTTFNQTEYGASAAMVLFLLFLPLAVLFGEEFKIRQNQNQKHSSVDDPLPEVKVVAAAAAEAENNNNHHINNKLVESRWWENVLSPPERGEDYNILQALFSIDMLILFFAGTCGCGGTLTAIDNLGQIGTSLGYPKKSISTFVSLVSIWNYLGRVFSGFVSEHMLIKYKFPRPLMFTMILLLSCVGHLLIAFNVPNSLYVASVIIGFGFGAQWPLIFAIVSEVFGLKYYSTLYNFGGMASPIGLYVLNVRVTGHLYDKEAKRQLAASGIKRHAGQELNCVGTSCYKLSFLIIAAATFAGAIVSLILVVRTYSFYKGDIYKRYTVEEEEEKKEVRGCGS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60717g00008 584 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 563 - -
Stsc60717g00008 584 CDD MFS_Mch1p_like 28 546 - -
Stsc60717g00008 584 FunFam Nodulin family protein 341 562 - -
Stsc60717g00008 584 Gene3D MFS general substrate transporter like domains 346 559 IPR036259 -
Stsc60717g00008 584 Pfam Major Facilitator Superfamily 370 557 IPR011701 GO:0022857|GO:0055085
Stsc60717g00008 584 Pfam Nodulin-like 29 273 IPR010658 -
Stsc60717g00008 584 SUPERFAMILY MFS general substrate transporter 28 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60717g00008 Stsc-Chr60717 35436 37190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60717g00008 11 568 Nodulin-like Gene Family AT2G39210 65.426 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60717g00008 - - gmx:100808975 837.41