Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60715g00003 ATGACCGGCGGTGGATCGTCGGGTAGGTTGCCGACGTGGAAGGAGAGAGAGAACAACAAGCGTAGGGAGAGAAGGCGGAGAGCGATTGCCGCCAAGATCTACGCTGGTCTTCGAGCTCAAGGTAACTACAAGCTTCCCAAGCACTGTGATAACAACGAGGTCTTGAAAGCTCTCTGTGCCGAAGCTGGTTGGATTGTAGAAGAAGATGGTACTACCTACCGCAAGGGATGCAAGAGGCCACAAGGTGAGATTGGAGGAACTCCGGCGAACATGAGTGCTTGTTCATCAATACAGCCAAGTCCACAGTCATCAGCGTTTCCAAGCCCTGTTCCTTCTTACCATGCCAGTCCAACATCATCATCCTTCCCCAGTCCCTCTCGTGTTGATCCCAACCTTCAAAACCCCTCTTCATTCCTCCTACCATTCATTCATAACATCACCTCCATCCCTACAAACCTTCCTCCTCTTAGGATATCCAATAGTGCCCCTGTTACCCCTCCTCTTTCTTCCCCAACCTCCAGGGGTTCTAAAAGAAAGGCGGATTTCGATTCCTTCTCCAATGTATCCTCTCTTAATTCGTTTCGCCACCCTCTCTTCGCGGTGTCCGCGCCTTCCAGCCCCTCCCGCCGCCACCAATTGGCTACTTCCACCATTCCTGAGTGTGATGAGTCTGATGCTTCCACTGTGGACTCCGGTCGCTGGGTTAGTTTCCAGACAACCACGGCCTCGGCTGCTCCTCCTTCGCCTACCTTTAACCTTGTGAAACCAGCAATGCAGCAGATCACTCCTCAGGGCTCCATGGATATGAATGAAGGCATGCAATGGGGCCAGGCTGCAGAGAGAGCAAGAGCATCGGATTTTGACTTTGAGAATGGCAGAGTGAAGCCATGGGAGGGTGAGAGAATACATGAGGTGGGAATGGATGAGTTGGAACTTACTCTAGGGTGTGGAAAGGCCTGA 960 0.5219 MTGGGSSGRLPTWKERENNKRRERRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKRPQGEIGGTPANMSACSSIQPSPQSSAFPSPVPSYHASPTSSSFPSPSRVDPNLQNPSSFLLPFIHNITSIPTNLPPLRISNSAPVTPPLSSPTSRGSKRKADFDSFSNVSSLNSFRHPLFAVSAPSSPSRRHQLATSTIPECDESDASTVDSGRWVSFQTTTASAAPPSPTFNLVKPAMQQITPQGSMDMNEGMQWGQAAERARASDFDFENGRVKPWEGERIHEVGMDELELTLGCGKA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60715g00003 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 130 IPR008540 -
Stsc60715g00003 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 316 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc60715g00003 319 MobiDBLite consensus disorder prediction 79 130 - -
Stsc60715g00003 319 MobiDBLite consensus disorder prediction 158 175 - -
Stsc60715g00003 319 MobiDBLite consensus disorder prediction 88 130 - -
Stsc60715g00003 319 MobiDBLite consensus disorder prediction 158 181 - -
Stsc60715g00003 319 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60715g00003 Stsc-Chr60715 12821 14738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60715g00003 9 319 BZR Transcription Factor Family AT1G75080 61.111 1.41e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc60715g00003 BES1_N 5.3e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60715g00003 K14503 - gmx:100812095 453.366