Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60713g00001 ATGGCTTTAACCTTGATTGCAATTGTTGGTGGTGTTTTGTTCTTGTTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGATACATGAACAAGAATAAAAGCTTGCCACAAGGGACAATGGGGTTGCCACTTTTTGGAGAAACAACTGAGTTTCTTAAACAAGGTCCTAACTTCATGAAAAACAAAAGAGCAAGGTATGGCAGTTTCTTCAAAACACACATATTAGGGAGCCCTACAATTGTATCACTGGATGCAGAGATGAACAGATACATTCTAATGAATGAATCAAAAGGGCTTGTTCCAGGATACCCTAAATCCATGTTAGACATCTTGGGAAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACTTGAGAGGTGCCTTGCTTTCCATCATCAGCCCCACCATGATCAGAGATCAGCTTTTGCCTAAAATTGATCAGTTCATGAGATCCCACCTTAGCAATTGGGACAATCAACTCATTGACATCCAAGACAAAACCAAACAGATGGCCTTCCTTTCATCACTCCGGCAGATCGCTGGCAAAGAATCAATCAGAATAAAAGATAGAATCACGCCGGAGTTCTCCAAACTAGTCTTAGGAACCCTTTCTCTGCCTATTCCCCTTCCGGGGACGAATTATAGTCGCGCATTTCAGGCAAGGAAAGCTATTGTGAGCATAATAAGTGAAGTAATAGAAGAAAGGAGAAAATCCCAAGAAACACACAAAGACATGCTTGCTGGATTGATGGGAAATGATGAGAGTAGATACAATCTAAGTGATGAAGAAATCATTGATCTAGTGATTACAGTTATCTATTCTGGTTATGAAACTGTTTCAGCTACTTCAATGATGGCAGTCAAGTATCTTCATGACCATCCCAAAGCACTTCAACAACTCAGAGAAGAGCAGTTGGCCATTAGACAAAGGAAGAAACCAGATGAGCCACTTGATTACAACGATATCAAGTCAATGAAGTTTACTCGCGCGGTGATTTTTGAGACCTCTAGATTGGCCACAATAGTTAATGGGGTCCTAAGGAAAACCAATGAAGAAATGGAACTAAATGGTTATTTGATTCCCAAAGGATGGAAGTTATATGTATTCTTAAGAGAGATAAATTATGACCCTTCTCTATATCCTCAACCATTAAAGTTCAATCCATGGAGATGGCTGGGGAACCTAGAATCAAATAACCACTGCTTGGTATTTGGAGGAGGTACCAGATTGTGTCCAGGGAAAGAGTTGGGGATAGTAGAAATTTCAACTTTCTTGCACTATTTTGTAACTAGATACAGTTGGGAAGAAGTGGGAGGAACACTACTGAAATTTCCAAGAGTTCAAGCACCTAATGGATTGCACATAAGGTGTCATCTTATTAATTAG 1401 0.4004 MALTLIAIVGGVLFLFCFCSALLRWNEVRYMNKNKSLPQGTMGLPLFGETTEFLKQGPNFMKNKRARYGSFFKTHILGSPTIVSLDAEMNRYILMNESKGLVPGYPKSMLDILGKCNIAAVHGSTHKYLRGALLSIISPTMIRDQLLPKIDQFMRSHLSNWDNQLIDIQDKTKQMAFLSSLRQIAGKESIRIKDRITPEFSKLVLGTLSLPIPLPGTNYSRAFQARKAIVSIISEVIEERRKSQETHKDMLAGLMGNDESRYNLSDEEIIDLVITVIYSGYETVSATSMMAVKYLHDHPKALQQLREEQLAIRQRKKPDEPLDYNDIKSMKFTRAVIFETSRLATIVNGVLRKTNEEMELNGYLIPKGWKLYVFLREINYDPSLYPQPLKFNPWRWLGNLESNNHCLVFGGGTRLCPGKELGIVEISTFLHYFVTRYSWEEVGGTLLKFPRVQAPNGLHIRCHLIN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60713g00001 466 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 CDD CYP90-like 65 461 - -
Stsc60713g00001 466 PANTHER CYTOCHROME P450 26 35 444 - -
Stsc60713g00001 466 SUPERFAMILY Cytochrome P450 30 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Stsc60713g00001 466 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 Pfam Cytochrome P450 38 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 Gene3D Cytochrome P450 28 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60713g00001 466 FunFam Cytochrome P450 85A1 26 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60713g00001 Stsc-Chr60713 3098 7307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60713g00001 85 461 Cytochrome P450 AT5G38970 67.368 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60713g00001 K09590 - gmx:100805958 728.398