Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60707g00005 ATGGGTTTCACTGGAGAATTGGTAAGAAGTGTTTTCTCCAGAAACCGTTCTGCTGCATCATCATATGAAAGCAAAGTTAGGCGAAATTCGGCCGAAAATCGAAGATGGGGTAATTCTGTTAGATCATACTTGTGTGGAAATGAATTCAATTCAGTTGTGGCAGAGGAGGATTCAGCTTCACTGAAGAGCTCTGAAGTCACAGTTTCACAACCAATAATACAAGAGAATTTGAGTGATAGAGAAGATGCCAAAAGTGAAGAAACTGTGGAGAATGTAATAGAAGAAGAAGAAGAAGAAGAAAGGCCAAATTCAAGTAGCTCTACATTCTTGAGTGAGGAAGAAGCAGCAATTCGGATTCAATCAGCATATAGAAGCTTTCTGTTAAGGCATCGAAACGATGAAATCAGATCCAATAATGGTGAAGTGGAGCTCAATTTAGTAACTCAAAGTCCAGATAGAAAGTCCATGGGGACATCAGTTGAAGTTCTAACTGCAAATTCGGCTGAAGTTTTCTCGGTTGAAGGTGAAAAAATCAGCATTTACCAGCGAATTCATCGCAGGACAAAGAGTCATGTAACAAAGCCGAAGGAAGAATGGGATGATAGCACTGTGAGTAGCTATGTTTCGAAAATGCGGATGCAGAACAGAATGGAGGCAACAACCAGAAGGGAAAGAGCACTAGCTTATGCTTTCTCTCAACAGCTAAGAATCTGTTCAAAGAGAAGACCAACAAAGTGCAACAGCATAGAATCTAATATGAGCTGGAGCTGGCTCGAACGGTGGATGGCAACGCGGGTTCCAGACACTGCTGCATTATCTGCTGAAAGCCATGCTTTGAAGCAGCATGATCCTCCTAACAGTAACTTCACAATCAAGACAAGGTTCTTGGATGCTGCTGCTGGGGAAGAAAAAGAGAGCTGTGGTTCGAATGAAGTGCTGCCTCATTTTGATAGCTATTCAGTAAATTCAAGAGAAGAAAATTGTAGCTTCAAATCACAAGAAAAAACCAACTTCAAAGCTAGGAGAACCGTGTCAAGGCGAAAAACAGTGCCAAGCTATCAGTTCCTTGAAGAGCAGCCAAAGGTATGCAAGAAAGAAGGCTCAAACAATGCAAGCAAGGATGTTAAGCAAAAAACAAAAGCAAGTGGGAAGGAAGATGAAACTGAAACTGAAACTAAGCATCCCTAA 1188 0.4141 MGFTGELVRSVFSRNRSAASSYESKVRRNSAENRRWGNSVRSYLCGNEFNSVVAEEDSASLKSSEVTVSQPIIQENLSDREDAKSEETVENVIEEEEEEERPNSSSSTFLSEEEAAIRIQSAYRSFLLRHRNDEIRSNNGEVELNLVTQSPDRKSMGTSVEVLTANSAEVFSVEGEKISIYQRIHRRTKSHVTKPKEEWDDSTVSSYVSKMRMQNRMEATTRRERALAYAFSQQLRICSKRRPTKCNSIESNMSWSWLERWMATRVPDTAALSAESHALKQHDPPNSNFTIKTRFLDAAAGEEKESCGSNEVLPHFDSYSVNSREENCSFKSQEKTNFKARRTVSRRKTVPSYQFLEEQPKVCKKEGSNNASKDVKQKTKASGKEDETETETKHP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60707g00005 395 ProSiteProfiles IQ motif profile. 112 141 IPR000048 GO:0005515
Stsc60707g00005 395 MobiDBLite consensus disorder prediction 359 395 - -
Stsc60707g00005 395 PANTHER IQ-DOMAIN 5-RELATED 190 361 - -
Stsc60707g00005 395 MobiDBLite consensus disorder prediction 339 395 - -
Stsc60707g00005 395 MobiDBLite consensus disorder prediction 73 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60707g00005 Stsc-Chr60707 55738 57687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60707g00005 1 354 IQD Protein Family AT5G35670 39.206 5.55e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60707g00005 - - gmx:100807137 496.893