Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60705g00010 ATGATGATGAATCAGGGACAGGGAAGAGAAAACTTGGTTCTTCAGAAAACCGAGGCCTGTGCCTTCGTGGCAGGTGTTGAACCTCATGAGCTGCTTCCCTCTTCTGTCACCGTTCAAGGGAACAACTCCATCACCAACACCAACAGCAACAGGATTCTAGCTACTACTATTTTTCATCATAATCATAACCATAACGGTTCATCATCATCAGAACCGGGTCAGATCCTGCCTGGTGATGATGATGATAATCTGTTCCAACCTCATCAGGAGAAGGAGCAGGAGGAGGAGGTAGGGCTTCTTGCTACCTTTGGCAATGTCCTCAGGAAGAGGAGAATGGCTAGGATGAGGAGGAGGTCCTCACCAACACTGATGCACCTTCACTTCCACACTAACAACACCACCGCTGCCGCTGCCGCTGCCGCTGCTGCCGCCACCAACACCGCTGTGTTTGGCTCTTTCTCTTCAGTGCAACCTGCTTTAAATTTGGGAACTCGAGTAGTTGAGGACATGCCTAAATGCATGTTGGAGTTGGAACAATGCTTTGGGCACTCTGCATGTTATGCAATCGATCATGCAAGGCTGAGATTCCTTTTCCAGAAGGAGCTAAAGAACAGTGATGTTAGCTCCCTTAGGAGGATGGTATTGCCAAAGAAGGCTGCGGAGGCTTGTCTTCCTCCTCTTGAATCAAAGGAAGGAATCGTTATCACCATGGATGATCTTGATGGTGTTCATGTCTGGAGTTTCAAGTACAGGATCGTCTATGCCGGCTACCGGTCAGGCCGCTTGGGTCAGCCGACCTCAGCAGACTACGTCGGCCTATCTAACCATGCCGGCCGTCTTGTCAACTGA 849 0.4982 MMMNQGQGRENLVLQKTEACAFVAGVEPHELLPSSVTVQGNNSITNTNSNRILATTIFHHNHNHNGSSSSEPGQILPGDDDDNLFQPHQEKEQEEEVGLLATFGNVLRKRRMARMRRRSSPTLMHLHFHTNNTTAAAAAAAAAATNTAVFGSFSSVQPALNLGTRVVEDMPKCMLELEQCFGHSACYAIDHARLRFLFQKELKNSDVSSLRRMVLPKKAAEACLPPLESKEGIVITMDDLDGVHVWSFKYRIVYAGYRSGRLGQPTSADYVGLSNHAGRLVN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60705g00010 282 CDD B3_DNA 196 252 IPR003340 GO:0003677
Stsc60705g00010 282 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 107 252 IPR044800 GO:0003700
Stsc60705g00010 282 Gene3D - 187 272 IPR015300 -
Stsc60705g00010 282 SUPERFAMILY DNA-binding pseudobarrel domain 196 253 IPR015300 -
Stsc60705g00010 282 MobiDBLite consensus disorder prediction 60 74 - -
Stsc60705g00010 282 MobiDBLite consensus disorder prediction 60 85 - -
Stsc60705g00010 282 Pfam B3 DNA binding domain 198 252 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60705g00010 Stsc-Chr60705 40709 44528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60705g00010 189 251 B3 DNA Binding Superfamily AT3G26790 80.952 1.98e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60705g00010 K09287 - gmx:100813055 147.902