Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60705g00002 ATGGCGAGCAGGTACTGGGTGGTGTCTCTTCCCGTCCACAACTCCGCTTCCACTCTCTGGAACCAGCTCCAGGATCAAATCTCCAAGCACTCTTTCGACACCCCTCTCTACAGGTTCAACATCCCTAATCTCCGCGTCGGAACCCTAGACTCTCTCCTCTCTCTCAGCGATGATCTCGCCAAGTCCAACACTTTCATGGAAGGAGTGTCGCACAAGATCCGGCGCCAGATTGAGGAACTTGAGAGGATCTCCGGCGTCGAGAGCAGTGGCCTCACTGTCGATGGTGTCCCTGTTGATTCCTATTTGACCAGATTTGTTTGGGATGAAGCGAAGTACCCGACTATGTCGCCGTTGAAGGAAATTGTTGATGCAATTCATGGTCAAGTAGCAAAGATTGAGGATGATCTCAAGGTTCGTGTTTCTGAGTACAACAATATCCGCAGTCAGCTTAATGCTATCAACCGAAAGCAAACTGGAAGCTTAGCTGTCCGTGACATTTCCAACTTGGTAAAACCTGAGGATATTATAACTTCAGAACATTTAACTACTCTTCTTGCCGTTGTTTCCAAGTATTCACAGAAGGATTGGCTCGCAAGCTATGAAACACTGACAAACTATGTGATTCGTGATTTTGAATACAATCCAGAAACACACGAGGGCCGAAAGCAAGAGTTAGATAAATTAATGCGGGATCAGGAATCTTTGAGAGGTTCTTTGTTGCAGTGGTGCTATACCAGCTATGGAGAGGTTTTCAGCTCTTGGATGCACTTCTGTGCTGTACGTTTGTTTGCTGAGAGCATTCTGAGATATGGTCTACCACCATCTTTCTTGGCATGTGTTTTAGCTCCATCTGTAAAAGCTGAAAAGAAAGTACGTTCTATCCTTGAAGGTTTGAGTGATAGCACAAACAGTGCATACTGGAAGTCTGAGGATGATGTAGGGATGGCGGCCCTAGCAGGTGAAGACGCCCACCCCTATGTCTCCTTCACAATCAATCTTGTTTGA 1005 0.4637 MASRYWVVSLPVHNSASTLWNQLQDQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLAKSNTFMEGVSHKIRRQIEELERISGVESSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDAIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDISNLVKPEDIITSEHLTTLLAVVSKYSQKDWLASYETLTNYVIRDFEYNPETHEGRKQELDKLMRDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPSVKAEKKVRSILEGLSDSTNSAYWKSEDDVGMAALAGEDAHPYVSFTINLV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60705g00002 334 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 2 208 IPR004907 GO:0033180|GO:0046961|GO:1902600
Stsc60705g00002 334 SUPERFAMILY Vacuolar ATP synthase subunit C 2 333 IPR036132 GO:0015078|GO:0033180|GO:1902600
Stsc60705g00002 334 Gene3D - 41 201 - -
Stsc60705g00002 334 Pfam V-ATPase subunit C 205 327 IPR004907 GO:0033180|GO:0046961|GO:1902600
Stsc60705g00002 334 Pfam V-ATPase subunit C 5 208 IPR004907 GO:0033180|GO:0046961|GO:1902600
Stsc60705g00002 334 CDD V-ATPase_C 5 331 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60705g00002 Stsc-Chr60705 7122 11646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60705g00002 1 333 Primary Pumps ATPases(2) AT1G12840 74.332 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60705g00002 K02148 - gmx:100803728 579.711