Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60704g00007 ATGTCTCTTGAGTCAGCTTCTGCTGACCAGAACAACATTAGAGGGATTCCCACTCATGGTGGACGCTATGTTCAGTACAATATCTATGGCAATCTCTTTGAGGTTTCAAGGAAGTATGTTCCCCCAATTCGCCCTGTGGGAAGAGGAGCTTATGGTATTGTTTGTGCTGCTGTAAATGCGGAGACACGTGAAGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCAAAGAGGACCTTACGAGAAATTAAACTTCTCCGGCACATGGATCATGAAAATGTGATAGCCCTTAAAGACATTATAAGACCACCACAGAGGGAGAACTTCAATGATGTGTATGTTGTTTATGAGTTAATGGATACTGATCTGCATCAAATAATTCGGTCAAATCAACCATTGACCGACGATCATTGTCGGTATTTTTTGTATCAATTGTTACGAGGACTCAAATATGTACATTCAGCGAATGTCTTACACCGTGATCTAAAGCCTAGCAACTTGCTATTGAATGCGAATTGTGACCTTAAGATCGGAGACTTTGGGCTTGCTAGAACTACATCCGAAACTGATTTTATGACCGAATATGTGGTCACTCGGTGGTACCGAGCTCCAGAATTGCTTCTTAATTGTTCAGAATATACTGCAGCAATTGATATATGGTCTGTTGGTTGCATCCTCGGTGAAATCATGACCAGACAACCCCTCTTTCCCGGAAAAGATTACGTTCATCAGCTGAGACTGATCACCGAGCTCATAGGTTCACCTGATGACGCCAGCCTTGGATTTCTGCGGAGTGATAATGCTCGTAGATATGTAAGACAGCTTCCACAATATCCAAGGCAGCAATTCGCTGCTAGATTTCCGAACATGTCTCCTGGCGCTGTTGATTTGTTAGAAAGGATGCTTGTATTTGATCCAAACAGGCGCATTACAGTTGATGAGGCATTGTCTCACCCGTACCTGGCACCGCTTCACGATATTAACGAGGAGCCTGTTTGCTCGAGACCTTTCAGTTTTGATTTTGAGCAACCGTCGTTCACCGAAGAAGACATCAAGGAACTCATCTGGAGAGAATCTGTGATGTTCAATCCTGATCCACCTATTTATTGA 1125 0.4311 MSLESASADQNNIRGIPTHGGRYVQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVIALKDIIRPPQRENFNDVYVVYELMDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPQYPRQQFAARFPNMSPGAVDLLERMLVFDPNRRITVDEALSHPYLAPLHDINEEPVCSRPFSFDFEQPSFTEEDIKELIWRESVMFNPDPPIY 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60704g00007 374 SMART serkin_6 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60704g00007 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 327 - -
Stsc60704g00007 374 Pfam Protein kinase domain 44 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60704g00007 374 FunFam Mitogen-activated protein kinase 124 353 - -
Stsc60704g00007 374 SUPERFAMILY Protein kinase-like (PK-like) 43 333 IPR011009 -
Stsc60704g00007 374 FunFam Mitogen-activated protein kinase 25 134 - -
Stsc60704g00007 374 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60704g00007 374 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
Stsc60704g00007 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Stsc60704g00007 374 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Stsc60704g00007 374 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707|GO:0005524|GO:0006468
Stsc60704g00007 374 CDD STKc_TEY_MAPK 33 369 - -
Stsc60704g00007 374 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60704g00007 Stsc-Chr60704 52914 57076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60704g00007 1 369 MAP Kinase Gene Family AT4G01370 88.172 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc60704g00007 Pkinase 1.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60704g00007 K20600 - gmx:100815697 723.005