Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60703g00010 ATGGATCTGTCAAGGCTTGTCCAAAGTTTTCTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTAATATCAAAGGCTACAACGGTTGATGTTATATGCAATGGAGAAGGATCTAACAGCAATGGTGCTGTGCAACTGATGTTTGCTGAGTTGCAAATGCTGACTCCGATGGTGGCAACTAGAGAAGTGTATTTCGTGAGATGCTGCAGAGAGTTAAGTGATGAAAAGTGGGGAATTGTTGATGTTTCAATAGACAAAGTAGAGGACAACATAGATGCATCTCTTCTTAAATGCAGAAAACGCCCTTCTGGCTGCATAGTTGAGGATAACTCCAATGGTCATTGCAAGGTAAGTTGGGTGGAACACTGGGAATGTGAGAAAAGTAGTGTCCATAGAATGTATAGAAGCATTGTGAATAATGGTGCAGCTTTTGGGGCAAGGCATTGGATATCAACACTTCAACTTCAATCTCAACGTCTCGTTTTCTTCATGGCAACTAATGTTCCCATCAAGGATTCAACCGGTGTTGCCACGTCAGCTGGAAGAAAGAGCATATTGACTTTGTCAGAAAGAATGAGAAGGAGTTTTTGCCATGCAGTTGGAGCGTCAAGCTTCCATAGATGGACAAAGGTGACAAGTAAAAATGGAGAAGACATTAGGATCAGTTCTAGGAAGAACTTGAATGATCATGGTGAACCTCTTGGTGTAATCTTGACAGCTGTTTCTTCAGTGTGGCTTCCTCTCTCTCCCAAATTTCTTTTCCATTTCTTGAGGGATGAAAATCATAGATCTCAGTGGGATATCATGGTCACTGCTGGTGGGTCATCGGTGAAGTCCATAGCCACTTTAGCTAAAGGCCAAGATCGGGGCAATTCTGTAAATATCCATGAGATTACATCAAAAGTAAACATAAAGTGGATACTACAAGATAGCTCCAGAAGTGGTTATGAATCAATGATAGTATATGCTCCTGTGGACATTCCTAGCATGAAGAATGTGATTAATGGATGTGATTCAAGCAACATTGCAATATTACCATCTGGCTTCTCTATTCTCCCTGATGGAGTTAATGCAAGGCCATTGCTCATTACTGCTTCTACTACTACTACTACTACTGAAGAAGACCAACAAGAAAATAAGAACACTACTGAAGAAGAAGAAGGAGGGTCTTTGTTAACAATGGCATTCCAAGTAATTACTACTAATAATAGTAATAATGGTTCTCCATCATCAGCAAAATTGACTTTGGAGTCTGTGGAATCAGTCAAGAGTATGGTTTCTTGTACATTAAGGAATATCAGAACATGTTTACAATGTGAAGAAGATTGA 1332 0.3994 MDLSRLVQSFLDVNQWKEMFPCLISKATTVDVICNGEGSNSNGAVQLMFAELQMLTPMVATREVYFVRCCRELSDEKWGIVDVSIDKVEDNIDASLLKCRKRPSGCIVEDNSNGHCKVSWVEHWECEKSSVHRMYRSIVNNGAAFGARHWISTLQLQSQRLVFFMATNVPIKDSTGVATSAGRKSILTLSERMRRSFCHAVGASSFHRWTKVTSKNGEDIRISSRKNLNDHGEPLGVILTAVSSVWLPLSPKFLFHFLRDENHRSQWDIMVTAGGSSVKSIATLAKGQDRGNSVNIHEITSKVNIKWILQDSSRSGYESMIVYAPVDIPSMKNVINGCDSSNIAILPSGFSILPDGVNARPLLITASTTTTTTEEDQQENKNTTEEEEGGSLLTMAFQVITTNNSNNGSPSSAKLTLESVESVKSMVSCTLRNIRTCLQCEED 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60703g00010 443 CDD START_ArGLABRA2_like 1 159 - -
Stsc60703g00010 443 Gene3D - 3 159 IPR023393 -
Stsc60703g00010 443 SMART START_1 1 160 IPR002913 GO:0008289
Stsc60703g00010 443 SUPERFAMILY Bet v1-like 181 358 - -
Stsc60703g00010 443 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 438 IPR042160 -
Stsc60703g00010 443 SUPERFAMILY Bet v1-like 3 159 - -
Stsc60703g00010 443 Pfam START domain 1 159 IPR002913 GO:0008289
Stsc60703g00010 443 ProSiteProfiles START domain profile. 1 163 IPR002913 GO:0008289
Stsc60703g00010 443 MobiDBLite consensus disorder prediction 367 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60703g00010 Stsc-Chr60703 41020 46735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60703g00010 1 442 Homeobox Transcription Factor Family AT1G79840 58.969 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60703g00010 K09338 - gmx:100806193 630.557