Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60699g00013 ATGTGTTTTTCAGGGTTCATCAGCTTAGATTGCGGAGCACCTGCCATGTCCACCTCTAGTTATTTGGACATGCAATATATTTCAGATGCGGATTTCATAAGCAGTGGTGTACCTAAAACAGTGAAATCTGACTTCGTGACTTACTTTAAACAAGAGCAACTTTGGACTCTGAGAAGCTTCCCGAAAAGAACAAGAAACTGCTACAAGATAAACAACATCACAATGGGCTCCAAATATCTGATCCGTCTTCAGTTCGCGTACGGAAACTACGACGGGCTTAACAGTTTTCCAGAGTTTGATGTGTTCCTTGGAATTAACAGGTGGGATACAGTGAGCCTCGGACCCGAGGAGTTCAGGCTCAAAGAGATTATGCATAGAGCTTCAAAGGAATACATAAATATCTGTTTGGTGAATACAGGCCTTGGCACGCCATTCATTTCAACCATAGAATTCAGGCCTTTGAAAAACGATACCTATCTTGCTCCATCTGCTGGATCGTCACTCGTTACTTACTCCCATAACAATTTAGGGTCTTCATTATCCACCAACTACGCATACAGGTATAAAGATGATCCGTATGATCGTCTCTGGAAATCCCGCATGCAACTTGATTGGGTAACACTTAATAGTAATATAACAGCTGATGCCGTTACCCATAACGATTACGAGTTGCCAGAAGCTGTCATGAGCAGCGCGATAACAGCGGCAAATGCAAGTGATCCATTGGTGATAAATTGGACGGCGCCAATCTATGCAATAACGAGGATCCAGTCAGTTTATGGTTTGACAAGAGATGAGTGGCAAGGAGATCCGTGCGGCCCTGCAGGCTACACGTGGCAGTGGGACGGTCTCAATTGTACTCGTCATCTAAATGAATCTCCTCGAATTACCGCCGTGAATTTATCTTGGAGTGGATTGACGGGAACTATAGATCTTTCCTTTTCAAACCTCACCATGTTGGAAAAGTTGGATTTATCAAACAACAAGTTGGATGGCCAAGTTCCGGATTTTCTCTCTCAATTACATAACTTAAAGATCTTGAACTTGGCGGGCAATAACCTCATAGGCTCATTACCATCTACTCTAGTTGAGAAATCTAACAAAGGTTTATTGTTACTCAGTGCTGATCAAAATCTTCATCTATGTGAATCTGGAGAATGCAAAGTCGAAAAGAAGAAAAAGAAGACAAAGCCATTATTAGTAGCTGCAGCTATTGGGATTTCAGTGGCTCTAGTGGCCGTGGCCGTGGCCGCCGCAGCTATAGTCTGGACCCTGAAAAAAATAAAAAACAAAGGGGAGATCAAGCAAGACGATGATGATGTATCACTCAGGTTCAAGAATAAAATCTATTCATATTCTGATATTCTTAAATTCACCAACAACTTCAGAAAAATCCTTGGTAAAGGTGGGTTTGGAACAGTTTATATGGGATATCTTGATGACGCTCCAGTCGCAGTGAAGGTGCTTTCTCCATCCTCAGTCCTAGGTTATCAGCAATTCCAAGCAGAGGTTAAGCTTCTAATGAGAGTTCATCATAGAAATTTGACCTCCCTCGTTGGATATTGTAATGAAGGAACCAATAAGGCTCTCATATACGAGTATATGGCCAATGGAAATCTACATCAACATCTCTCAGCACAAACCAAATTCCTGAGCTGGAAAGACAGGCTCTGTATAGCAGTAGATGCAGCCCAAGGGTTGGAGTATTTACACAACGGTTGCAAGCCACCTATAATCCAAAGAGACGTAAAACCTTCAAACATTTTGTTGACTGAAAACTTGCACGCAAAATTATCTGATTTTGGTCTGTCAAAGATTATCCCGACCGATGGGGGTCATGTTTCAACGATTGTAGCCGGCACCACCGGATATTTGGACCCCGATTACTACCGAACAGGCAGATTAACAGAGAAGAGTGATGTTTACAGTTTTGGAGTTGTTCTCTTGGAGTTAATCACAGGTCAAGCAGCAATAATAATGACAGAAGATGATGAGAGAACTCACATAGGTAATTGGGTTAATTCGATGGTTGGGAGAGGGGATATCCATGGCATTGTTGACTCGAGATTAGGGGGAGACTTTGACTGTAACTCTGCCTGGAAGGTTGTGGAAACAGCAATGGCTTGTGTGTCTCAAAGCTCTAATGAAAGGCCAATCATAAGTGAGGTTTTGATTGAACTGAAGAACGCTTTAGCAATGGAATTAAGTCGAACAAAATATGGTGGTGGTGTCAACAATAATCATGAAGATTCATCTGTTCAACTGGTCTCAGTGAATGTAGAAAATGAATCAATTCCTCAGGCCAGGTAA 2310 0.4208 MCFSGFISLDCGAPAMSTSSYLDMQYISDADFISSGVPKTVKSDFVTYFKQEQLWTLRSFPKRTRNCYKINNITMGSKYLIRLQFAYGNYDGLNSFPEFDVFLGINRWDTVSLGPEEFRLKEIMHRASKEYINICLVNTGLGTPFISTIEFRPLKNDTYLAPSAGSSLVTYSHNNLGSSLSTNYAYRYKDDPYDRLWKSRMQLDWVTLNSNITADAVTHNDYELPEAVMSSAITAANASDPLVINWTAPIYAITRIQSVYGLTRDEWQGDPCGPAGYTWQWDGLNCTRHLNESPRITAVNLSWSGLTGTIDLSFSNLTMLEKLDLSNNKLDGQVPDFLSQLHNLKILNLAGNNLIGSLPSTLVEKSNKGLLLLSADQNLHLCESGECKVEKKKKKTKPLLVAAAIGISVALVAVAVAAAAIVWTLKKIKNKGEIKQDDDDVSLRFKNKIYSYSDILKFTNNFRKILGKGGFGTVYMGYLDDAPVAVKVLSPSSVLGYQQFQAEVKLLMRVHHRNLTSLVGYCNEGTNKALIYEYMANGNLHQHLSAQTKFLSWKDRLCIAVDAAQGLEYLHNGCKPPIIQRDVKPSNILLTENLHAKLSDFGLSKIIPTDGGHVSTIVAGTTGYLDPDYYRTGRLTEKSDVYSFGVVLLELITGQAAIIMTEDDERTHIGNWVNSMVGRGDIHGIVDSRLGGDFDCNSAWKVVETAMACVSQSSNERPIISEVLIELKNALAMELSRTKYGGGVNNNHEDSSVQLVSVNVENESIPQAR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60699g00013 769 Gene3D Transferase(Phosphotransferase) domain 1 535 744 - -
Stsc60699g00013 769 SUPERFAMILY Protein kinase-like (PK-like) 443 726 IPR011009 -
Stsc60699g00013 769 SMART serkin_6 460 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60699g00013 769 FunFam Leucine-rich repeat receptor-like protein kinase 433 534 - -
Stsc60699g00013 769 CDD STKc_IRAK 466 729 - -
Stsc60699g00013 769 Pfam Protein tyrosine and serine/threonine kinase 462 667 IPR001245 GO:0004672|GO:0006468
Stsc60699g00013 769 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 535 740 - -
Stsc60699g00013 769 Gene3D Ribonuclease Inhibitor 255 370 IPR032675 -
Stsc60699g00013 769 PANTHER OS07G0107800 PROTEIN-RELATED 251 731 - -
Stsc60699g00013 769 FunFam Leucine-rich repeat receptor-like kinase 249 383 - -
Stsc60699g00013 769 Pfam Malectin-like domain 9 248 IPR024788 -
Stsc60699g00013 769 Gene3D Phosphorylase Kinase; domain 1 443 534 - -
Stsc60699g00013 769 MobiDBLite consensus disorder prediction 742 769 - -
Stsc60699g00013 769 ProSiteProfiles Protein kinase domain profile. 460 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60699g00013 769 SUPERFAMILY L domain-like 280 367 - -
Stsc60699g00013 769 Pfam Leucine rich repeat 294 354 IPR001611 GO:0005515
Stsc60699g00013 769 ProSitePatterns Protein kinases ATP-binding region signature. 466 487 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60699g00013 Stsc-Chr60699 49636 54874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60699g00013 4 769 Receptor kinase-like Gene Family AT2G19210 41.714 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc60699g00013 PK_Tyr_Ser-Thr 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60699g00013 - - adu:107492765 744.191