Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60699g00012 ATGGGAATTTTCCTGCTTTTAGTATTTCAACTTCTCTGGAATCTCCCTATCATTGTTCATGCCCAGAATCAATCAGGCTTTGTTAGCATTGATTGTGGACTTGTGGATAAAGAAAGTTACACAGATGAAACAACTTCCATATATTACACTTCAGATTCCAGCATCATAGACAGTGGTGAATGCCACAGCATATCATCCAAATATAAGTCTTCTTCACTTGGCAAACAGTTCTGGAATGTTAGAAGTTTCCCAGAAAGAATCAGAAGCTGCTATACCCTTAATGTCCCTCAAGGAAGAAGAAGCAAGTATCTACTTAGAGCCAGGTTCATGTATGGAGACTATGATGGTAAAGATTCACTTCCACAATTTGATATCTATGTTGGATCTAAATGGTGGGAATCTGTGGTTTTTGAGGATCCAGCAAGTATAATTACCAAGGAAATCATCTATGTTGCTTCATCAGATTATGTTCATGTTTGCCTAGTTAACACCAACAAGGGTACACCTTTCATATCAGCTTTAGAGATTAGAGTTCTTAACAATGATGCTTATCTAATTAACTCGATGGAGCTTCTCGCGCGGTATGACATAGGATTACAGGATGATAAAATAGTCAGATTTCCAGATGATGTCCATGATAGAATATGGACACCTTACAATTCAAAAGATTGGAAACAGATAAACACTTCTCTGGCTATAGACAAGGGAGAAACTTCATACAACTTTTTACCATTACCACCTTCTACTGTGATGGAAACAGCAGCAATTCCAGCAAATAACAATGATAATATAGAATTTAGCTTCCATTCCAAGCATAATGCTTTTGCATACTATGTGTACTACTTCGTCGCCGAAATCCAGAAGCTTGAAGCGAATCAAGTTAGAGACTTCAACATTTTTTTGAATGGGGATGTTGTTAATAATGGTCCAGTGGATCTTGTGTATCTGAAGAGCCGGTATTACATATCGGTTTTGAATGAACCTCGGTTCGAAGTTTGGATTAACAGAACAAGCAGATCAACTCTTCCACCTCTTATCAGTGCAATAGAGATATATATGACTAAGGATTTCTCACAATCACAAACAAACCAAGCTGATGCTGCTGCTATAATGAATGTGAAGTCAAATTATGGAATAAAAAGAAATTGGCAAGGAGATCCATGCACTCCACTGAGTGACTTATGGGATGGACTTAACTGCAGCTATGCTGATTCTTCTTCACCAAGGATCATATCCTTGAACTTATCTTCCAGTGGTTTAACTGGAAATATAGCATCAAGCATATCAAATTTGAAGTCAATAGAATATTTGGATTTATCAAACAACAGTTTGACAGGAGCAGTGCCTGATTTCTTATCTCAGCTGCACTCCTTGAGGGTTCTGAACCTGCAAGGGAATCAGCTAACAGGAACAGTTCCAATGCAACTCAGAGAGCATTCAAATAAGGGCTTGCTTAAATACAGTTTTGGAGGAAATCAAGATCTTTGCTATTCAGGTTCATGCAACAAGAGTAATAAACTTGTGGCTCCATTGGTGGGATCACTAGGTGGAGCTTTTTTTATTCTAGCAGCAGCAATCACTTCTTTTTTCATATTCAAAAGACATAGAGTAGCCTCTGAAATGGGGAATCTGAGAGCATATTCAAGAATAAAGATGGAACTAGAGTCAAATAAACAACAATTTAGCTATGCTGAAGTCCAAAAAATCACCAAGAATTTCACAAGGATTGTGGGTAAAGGAGCATCTGGAATGGTGTACCATGGCCATGTAGGTGACACAGAAGTTGCTGTCAAAATGCTGTCTCCTTTAGAAGACTCAAACTCAGCCCAAGCATATCTCCAATTTCAGGCAGAGGCAAAACTTCTGGCTATAGCTCATCATAAATGCTTGACACCTCTTATAGGATATTGTGATGATGGCACAAACATGGCTCTCATCTATGAATACATGCCTAATGGAGACTTAGCCCACCACTTATCAGATAAAAGTGAAACTACATTGAGTTGGCAACAAAGGATTCAAATTGCAGTGGATGCTGCAGAAGGATTGGAGTATCTACATGAAGGTTGTTGTCCAGGAGTTGTTCACAGAGATATAAAGTCCAAAAACATATTACTAACTGAAAAATTTAGAGGCAAATTGGCTGATTTTGGTTTGGCCAAGATCTACCCTAATGAAAATGATACACACATGTGCACTGTTGTTGCTGGCACCCCTGGATACCTTGATCCACTGTACCACAGATCAAGCAAGTTGAGTGAAAAAAGTGATGTTTATAGTTTTGGAGTGGTTTTGCTAGAGATAGTTACAGGGCATCCAGCTATAAGCAGCAAAACAGAAGAGAGAACTCACATAATTAGATTGGTTGGATCTATGCTTAGTGAAAGGGAGGTCAATGATATTGTGGATCCAAGATTAGAAGGAAACTTTGATGTTGAATCTGCAAAGAAAGTGTTAGATATTGCAATGGCTTGTGTAGCAGCTGCTTCCATTAACAGGCCAACAATGAGTTATGTAGTTGCTCAACTCAAAAAGTGTTTGCCAAGTGATGATGATGATGTTGAAAATAATAAGATTCTTGTAGTTCATCAGAATCAGTTATTGCATGGATCTGATATTCATGAAAATTTACCAGCTGACAGCAGCATAATTGATATAATTAGTGGAGAGAGCTCTCTAGAAAGGTAG 2688 0.3821 MGIFLLLVFQLLWNLPIIVHAQNQSGFVSIDCGLVDKESYTDETTSIYYTSDSSIIDSGECHSISSKYKSSSLGKQFWNVRSFPERIRSCYTLNVPQGRRSKYLLRARFMYGDYDGKDSLPQFDIYVGSKWWESVVFEDPASIITKEIIYVASSDYVHVCLVNTNKGTPFISALEIRVLNNDAYLINSMELLARYDIGLQDDKIVRFPDDVHDRIWTPYNSKDWKQINTSLAIDKGETSYNFLPLPPSTVMETAAIPANNNDNIEFSFHSKHNAFAYYVYYFVAEIQKLEANQVRDFNIFLNGDVVNNGPVDLVYLKSRYYISVLNEPRFEVWINRTSRSTLPPLISAIEIYMTKDFSQSQTNQADAAAIMNVKSNYGIKRNWQGDPCTPLSDLWDGLNCSYADSSSPRIISLNLSSSGLTGNIASSISNLKSIEYLDLSNNSLTGAVPDFLSQLHSLRVLNLQGNQLTGTVPMQLREHSNKGLLKYSFGGNQDLCYSGSCNKSNKLVAPLVGSLGGAFFILAAAITSFFIFKRHRVASEMGNLRAYSRIKMELESNKQQFSYAEVQKITKNFTRIVGKGASGMVYHGHVGDTEVAVKMLSPLEDSNSAQAYLQFQAEAKLLAIAHHKCLTPLIGYCDDGTNMALIYEYMPNGDLAHHLSDKSETTLSWQQRIQIAVDAAEGLEYLHEGCCPGVVHRDIKSKNILLTEKFRGKLADFGLAKIYPNENDTHMCTVVAGTPGYLDPLYHRSSKLSEKSDVYSFGVVLLEIVTGHPAISSKTEERTHIIRLVGSMLSEREVNDIVDPRLEGNFDVESAKKVLDIAMACVAAASINRPTMSYVVAQLKKCLPSDDDDVENNKILVVHQNQLLHGSDIHENLPADSSIIDIISGESSLER 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60699g00012 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Stsc60699g00012 895 ProSitePatterns Protein kinases ATP-binding region signature. 577 598 IPR017441 GO:0005524
Stsc60699g00012 895 SMART serkin_6 571 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60699g00012 895 SUPERFAMILY L domain-like 372 479 - -
Stsc60699g00012 895 ProSiteProfiles Protein kinase domain profile. 571 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60699g00012 895 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 650 856 - -
Stsc60699g00012 895 Gene3D Transferase(Phosphotransferase) domain 1 650 867 - -
Stsc60699g00012 895 Pfam Protein tyrosine and serine/threonine kinase 573 843 IPR001245 GO:0004672|GO:0006468
Stsc60699g00012 895 Pfam Malectin-like domain 30 353 IPR024788 -
Stsc60699g00012 895 Gene3D Phosphorylase Kinase; domain 1 553 649 - -
Stsc60699g00012 895 Gene3D Ribonuclease Inhibitor 367 487 IPR032675 -
Stsc60699g00012 895 SUPERFAMILY Protein kinase-like (PK-like) 553 843 IPR011009 -
Stsc60699g00012 895 Pfam Leucine rich repeat 412 468 IPR001611 GO:0005515
Stsc60699g00012 895 PANTHER OS07G0107800 PROTEIN-RELATED 28 851 - -
Stsc60699g00012 895 FunFam Leucine-rich repeat receptor-like kinase 365 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60699g00012 Stsc-Chr60699 40861 44666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60699g00012 6 847 Receptor kinase-like Gene Family AT2G19210 47.836 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc60699g00012 Malectin_like 1.3e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60699g00012 - - gmx:100778537 1122.46