Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60699g00005 ATGACCACCGTACCGGGACAGTTGGTTTGGGAGATCGTGAAGAAGAACAACTGTTTCTTGGTTAAGCAGTTTGGAAGGGGCACTCAGAGCGTTGAGTTCAGTAGAGAAGCCAACAATCTCTACAATCTCAACTCCTTCAAGTACTCCGGTTTGGCAAACAAGAAAACTGTTACTATTCAGCCTGCTGGAAAGGATCAGTCTGTGTTGCTTGCTACAACAAAGACAAAGAAGCAAAACAAGCCGTCTGCATTGCTTCACAAATCTGTCATGAAGAAGGAGTTCCCTAGAATGGCAAAAGCAGTGAAAAAACAGGTTGCAGCTAACCACTACAGGCCTGATCTCACGAACGCAGCTCTTGCAAGGTTGAGTGTTGTCAATAGGAGCCTGAGGGTTGCAAAGTCTGGTGTCAAGAAGAGAAACAGACAGGCTGTGAGGGTGCATGGTAGGAAGTGA 453 0.4636 MTTVPGQLVWEIVKKNNCFLVKQFGRGTQSVEFSREANNLYNLNSFKYSGLANKKTVTIQPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFPRMAKAVKKQVAANHYRPDLTNAALARLSVVNRSLRVAKSGVKKRNRQAVRVHGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60699g00005 150 Gene3D - 6 133 - -
Stsc60699g00005 150 FunFam 60S ribosomal protein L28 5 133 - -
Stsc60699g00005 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Stsc60699g00005 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60699g00005 Stsc-Chr60699 16571 18161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60699g00005 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 72.028 2.10e-74 217