Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60698g00010 ATGTCCTCCGATACTCACGCCGCCACTCACGCCGCCACAAACGCTGCCACTCACGCCGCCCCTAATATCAACCCCAGGGGTCTACTCTGCAATGCTGCAGCTGGCGCAGCCGCCGGTGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTAATCAAAACTAGGTTTCAGGTTCATGGGGTACCGCAACTCCATAATGGACGTGTTAAAGGCAGTATTATAGTTGGTAGCTTGGAACAAATATTTCACAAGGAGGGGTTGCGTGGCATGTACCGTGGATTGTCTCCCACTGTGCTGGCTTTACTTCCAAACTGGGCTGTTTATTTTACCATGTATGAACAGTTCAAGAGCCTTCTTCAGCCTAAGGATTGCCATAATCTTTCAGTTGGAGCTAATATGGTGGCTGCTTCTGGTGCTGGAGCTGCTACTACAATGTTTACAAATCCACTTTGGGTTGTCAAGACTAGACTCCAAACACAGGGAATGAGATCTGGTGTTGTGCCATATAGGAGCACTCTTTCTGCATTGAGGAGAATTGCACATGAGGAGGGCATTAGAGGGCTATATAGCGGTCTTGTACCTGCGCTGGCTGGTATCAGCCATGTGGCCATCCAGTTTCCAACATACGAGAAAATAAAATGCTACTTGGCAACTCAAGGTGACACATCAATGGATAAACTTGGTGCACGAGATGTTGCAATTGCCTCGTCAGTCTCCAAAATTTTTGCGTCAACTCTAACATATCCGCATGAGGTTGTACGTTCCAGACTGCAAGAGCAAGGTCACCATTCTGAGAAAAGGTACTCGGGTGTGATTGATTGTGTTCAAAAGGTTTTTCGGCAAGAGGGCGTACCTGGTTTTTACCGTGGGTGTGCCACCAACCTTCTGAGGACAACACCAGCAGCCGTAATCACATTCACCAGCTTTGAAATGATACACCGTTTTCTTGTTTCAGTTTTTCCGTCTGATCCACAGCCTCAGATTTTGTGA 990 0.4717 MSSDTHAATHAATNAATHAAPNINPRGLLCNAAAGAAAGVIAATFVCPLDVIKTRFQVHGVPQLHNGRVKGSIIVGSLEQIFHKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQFKSLLQPKDCHNLSVGANMVAASGAGAATTMFTNPLWVVKTRLQTQGMRSGVVPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKCYLATQGDTSMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVQKVFRQEGVPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSVFPSDPQPQIL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60698g00010 329 FunFam NAD+ transporter 125 320 - -
Stsc60698g00010 329 Gene3D Mitochondrial carrier domain 124 319 IPR023395 -
Stsc60698g00010 329 Gene3D Mitochondrial carrier domain 5 123 IPR023395 -
Stsc60698g00010 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 118 IPR018108 -
Stsc60698g00010 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Stsc60698g00010 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 315 IPR018108 -
Stsc60698g00010 329 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 29 318 IPR044712 GO:0006862|GO:0055085
Stsc60698g00010 329 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 14 124 - -
Stsc60698g00010 329 Pfam Mitochondrial carrier protein 127 217 IPR018108 -
Stsc60698g00010 329 Pfam Mitochondrial carrier protein 233 317 IPR018108 -
Stsc60698g00010 329 Pfam Mitochondrial carrier protein 28 121 IPR018108 -
Stsc60698g00010 329 SUPERFAMILY Mitochondrial carrier 28 311 IPR023395 -
Stsc60698g00010 329 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Stsc60698g00010 329 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Stsc60698g00010 329 PRINTS Mitochondrial carrier protein signature 93 113 IPR002067 GO:0055085
Stsc60698g00010 329 PRINTS Mitochondrial carrier protein signature 236 258 IPR002067 GO:0055085
Stsc60698g00010 329 PRINTS Mitochondrial carrier protein signature 44 58 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60698g00010 Stsc-Chr60698 54577 58291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60698g00010 24 329 Chloroplast and Mitochondria Gene Families AT2G47490 79.085 1.43e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60698g00010 K15115 - gmx:100500213 542.347