Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60698g00009 ATGGCGGCAGAGGCAGCATTCTCCTTCTCAGTGGCATCCGTCGTTGAGGATGTGCTTCAGCAGCACGGTACTCGCCTCAAAGATCTTGATTTCGAGTCCAGGAAAGCAGAAGAAGCTGCATCCAGAAGATATGAAGCAGCAGGGTGGCTTAGAAAAATGGTTGGAGTTGTTGCGGCCAAGGATTTACCAGCTGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGTATTATTCTTTGTAATGTTATTAACAAGGTTCAATCCGGAGCTGTACCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCATTGATCCCTGATGGGGCACCATTATCAGCATATCAATATTTCGAAAACGTGAGGAATTTTCTGGTTGCTGTCCAGGAAATTGGAATTCCTACTTTTGAGGCATCTGATCTGGAGCAGGGAGGAAAATCATCCAGGATTGTGAATTGCGTCTTGGGCCTTAAATCCTATGGTGAATGGAAACAGAGTGGGGCAAATGGTGTGTGGAAATTCGGGGGAAATCTCAAACCAGCTACATCAACAAAATCTTTTGTGAGAAAGAACTCAGAGCCATTTACTAATTCCTTATCGAGGACCTCATCGCTTAATGAAAAGTCTGTAACTGGTCTTAACTGTGAAGCTGAATCTAATAGTAAAATGGTAGATAAGAGGCCAGAAGAAGTTCCAATGTTGGTTGAATCTGTTTTGAGCAAGGTTGTAGAAGAGTTCGAGCATCGGATTGCAAGCCGAGGAGGTGAACAGGTACAGCCAAAGATAGCTTCAAGAGATCCTGTTTCTCAAAGCAATGGCTCTGCATCAAAGTTTGTCATGCCAGATAAAAAGGTGGACAACAGGATTAATACGGTATCAAAGAAAGATGATTTCATTCATAAAAGCCGTGTTGCTGAGCAATCAAGAGGCCAACTTTTGAAGCAGAAAGAGCTATCTGATCAACAACAGAGAGAGATTCAAGAACTGAAGCACATTCTCCAAACCACAAAAGCTGGTATGCAGTTTATCCAAATGAAATTTCAAGAGGAGTTCTCTAATCTAGGTATGCACGTTTGTGGCTTAGCTCATGCTGCTTCCGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATATAATCAAGTTCAGGATCTTAAGGGGAGTATTCGAGTTTATTGTCGAGTGAGACCCTTCTTTCCGGGACAACCAAACCAGTTGAGCACAGTTGAAAATATAGAAGATGGAACTCTCACTGTGCATATTCCTTCCAAGAATGGGAAGGGACGCAAGTCCTTCAACTTTAACAAAGTTTTTGGACCATCTGCATCCCAAGCGGAGGTCTTCCTTGATATGCAGCCACTCATTAGATCCGTTCTTGACGGTTTCAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCGAAAGAGATCACAGAGAAAAGCCAAGGTGTGAACTACAGGGCTCTAAAAATTCGTAGTAGTTCCAACAAAGGCCTAAGTGTGCCGGATGCAAGCCTTGTCCATGTATCATCAACTCTTGATGTTATTGAGCTAATGAGCCTTGGGCAAAGGAACCGCGCAGTTGGAGCAACAGCCCTTAACGATCGTAGTAGCCGATCTCATAGTTGTTTGACTGTTCATGTTCAGGGAAGAGATTTGACATCTGGAACTGTGCTTCGCGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAAAGGGTAGACAAATCTGAGGCCACAGGAGACAGACTAAAAGAAGCACAGCATATCAACAAATCTCTTTCGGCGCTCGGGGATGTCATTGCTTCTCTTGCTCAGAAAAACTCACACGTTCCTTACAGAAACAGTAAACTCACACAATTGCTCCAGGATTCACTTGGTGGACAGGCCAAGACACTAATGTTTGTTCATATAAGTCCAGAGAGTGAGGCTATTGGAGAAACACTTAGTACCCTTAAGTTTGCAGAAAGGGTTGCCACGGTTGAACTTGGTGCTGCTCGAGTAAACAAGGATAGTGCAGATGTCAAAGAGCTCAAAGAACAGATCGCAAACCTAAAGGCAGCCTTGGCAAGAAAGGAAGGAGAATCAGAACATTCTTTCTCCGGTAGTTCTGAAAAATACAGGACAAGGACTGGTGATCTATCACCTTATCACCCAAACCAGCGAGGCACAGATGCTGAGGATCGCCCTGGATGCAGGCAACCAATGGTTGAGGTTGGCAATATAGGGCATCAAAGTAAGTCCAGATTTAGACACAAAACACAAAGCTTAGATTTTGATGAGATGTCATCAACTTCGCCACCCTGGCCCCCAGTAAGTAGTCCCGGGCAGCACTATGCAGAAGATGATAAAGAAACTGGTTCTGGAGAATGGGTGGATAAAGTCATGGTAAACAAGCAAGATATAAACAAAACTGACAACCTCTTAGGATGTTGGGAATCACCCGGGGCAAACGGGAACTTATCCGACGTGTTTTACCAAAAATATCTGCAAGACTCTTCTAAGATGTACTCGGAACAATCTTACAACATGTTCATGGGAGGCAACCAGTTCAACATGATGGCGGGTTCTGATGAAATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCTGAACCTGACTTGCTTTGGCAATTCAATCATTCTAAACTCACCACCATGACCATGACCAATGCAGTTGGATCAAAGACTAAGAGATCTATCCCAAAGTCATCAAAGAGCCCAGAAATGAGCAGGATCGGTGCTTCTGTTTCAAATAGAACTGGAAGGCATCCAGCTCCAGTTGATGCCAGACGTAAAGTTGGCAATAGAAAGTAA 2844 0.4392 MAAEAAFSFSVASVVEDVLQQHGTRLKDLDFESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLSAYQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNCVLGLKSYGEWKQSGANGVWKFGGNLKPATSTKSFVRKNSEPFTNSLSRTSSLNEKSVTGLNCEAESNSKMVDKRPEEVPMLVESVLSKVVEEFEHRIASRGGEQVQPKIASRDPVSQSNGSASKFVMPDKKVDNRINTVSKKDDFIHKSRVAEQSRGQLLKQKELSDQQQREIQELKHILQTTKAGMQFIQMKFQEEFSNLGMHVCGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQPNQLSTVENIEDGTLTVHIPSKNGKGRKSFNFNKVFGPSASQAEVFLDMQPLIRSVLDGFNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALKIRSSSNKGLSVPDASLVHVSSTLDVIELMSLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESEAIGETLSTLKFAERVATVELGAARVNKDSADVKELKEQIANLKAALARKEGESEHSFSGSSEKYRTRTGDLSPYHPNQRGTDAEDRPGCRQPMVEVGNIGHQSKSRFRHKTQSLDFDEMSSTSPPWPPVSSPGQHYAEDDKETGSGEWVDKVMVNKQDINKTDNLLGCWESPGANGNLSDVFYQKYLQDSSKMYSEQSYNMFMGGNQFNMMAGSDEMDELDAATSDSSEPDLLWQFNHSKLTTMTMTNAVGSKTKRSIPKSSKSPEMSRIGASVSNRTGRHPAPVDARRKVGNRK 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60698g00009 947 FunFam Kinesin-related protein3 507 710 - -
Stsc60698g00009 947 MobiDBLite consensus disorder prediction 768 796 - -
Stsc60698g00009 947 Pfam Microtubule binding 374 488 IPR031852 GO:0008017
Stsc60698g00009 947 Pfam Kinesin motor domain 495 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60698g00009 947 MobiDBLite consensus disorder prediction 698 741 - -
Stsc60698g00009 947 PRINTS Kinesin heavy chain signature 540 557 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60698g00009 947 PRINTS Kinesin heavy chain signature 571 589 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60698g00009 947 PRINTS Kinesin heavy chain signature 461 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60698g00009 947 PRINTS Kinesin heavy chain signature 620 641 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60698g00009 947 Coils Coil 677 704 - -
Stsc60698g00009 947 MobiDBLite consensus disorder prediction 253 278 - -
Stsc60698g00009 947 SMART kinesin_4 386 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60698g00009 947 PANTHER KINESIN-LIKE PROTEIN KLP-3 499 841 IPR027640 GO:0003777|GO:0007018
Stsc60698g00009 947 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 330 506 - -
Stsc60698g00009 947 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Stsc60698g00009 947 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Stsc60698g00009 947 MobiDBLite consensus disorder prediction 901 947 - -
Stsc60698g00009 947 Gene3D - 27 186 IPR036872 -
Stsc60698g00009 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 702 IPR027417 -
Stsc60698g00009 947 MobiDBLite consensus disorder prediction 901 927 - -
Stsc60698g00009 947 MobiDBLite consensus disorder prediction 699 713 - -
Stsc60698g00009 947 SUPERFAMILY Calponin-homology domain, CH-domain 38 173 IPR036872 -
Stsc60698g00009 947 CDD CH_AtKIN14-like 42 159 - -
Stsc60698g00009 947 ProSiteProfiles Kinesin motor domain profile. 388 670 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60698g00009 947 Gene3D Kinesin motor domain 497 699 IPR036961 -
Stsc60698g00009 947 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Stsc60698g00009 947 SMART ch_5 42 160 IPR001715 GO:0005515
Stsc60698g00009 947 Gene3D Kinesin motor domain 330 496 IPR036961 -
Stsc60698g00009 947 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60698g00009 Stsc-Chr60698 41362 46852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60698g00009 324 722 Calmodulin-binding Proteins AT5G65930 35.491 3.33e-65 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60698g00009 K10406 - gmx:100795476 1434.08