Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60693g00007 ATGGACCATCTCTTGATCCGCAAGTTCCGCCGCCGCTTACTTGCATGGCTTCACCGATCTCGCTCCGGTAGGGTGTTCTTTGTGAGGAGAATTCCGTACAAGGATGTTAAAAGGGCGACTGATGGTTTCCAGAGAGTCATTTATAGCAACTCTGAGGTTACTGCATATGCTGCCAGACAAATTCAATTTCTGGGGCGCTTGCATCACCGCCATCTTCTCTCCCTCAAAGGGTTTTCTGTGGGACAAGATAAGAGACTGCTCATATTTGATAACATAGAGAATGGAAGCTTAAAGGAGCATCTCAATGATCCCTTAAAGACTCCATTAAATTGGAGGACGAGGTTGCAGATTGTTAATGATGTCGTGGCAGCATTGGAATACTTATTTCTTTTCAGCGATCCACCAGCATATCATGTCTCCATCAGCTCAAGCAATATTATGTTAGATGAGAACTTTGCAGCTAAGCTATCAGATTTTCGCCTTCTTACTCCCAGTGAGAATTCTGTCATGATGCGGAATTCAGAAGATAGCATGAAGCAGAAGAGTTGCAAGATAATATTCCAACTTGGAGTGCTGATACTGGAACTGGTCACCGGCCAGTCTTCAGAGATGGAAGGTNNNNNNNNNNAGATTTTACAATTCCATAGATAA 651 0.4301 MDHLLIRKFRRRLLAWLHRSRSGRVFFVRRIPYKDVKRATDGFQRVIYSNSEVTAYAARQIQFLGRLHHRHLLSLKGFSVGQDKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIVNDVVAALEYLFLFSDPPAYHVSISSSNIMLDENFAAKLSDFRLLTPSENSVMMRNSEDSMKQKSCKIIFQLGVLILELVTGQSSEMEGXXXXILQFHR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60693g00007 216 Pfam Protein tyrosine and serine/threonine kinase 57 171 IPR001245 GO:0004672|GO:0006468
Stsc60693g00007 216 PANTHER OS01G0253100 PROTEIN 58 202 - -
Stsc60693g00007 216 ProSiteProfiles Protein kinase domain profile. 11 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60693g00007 216 FunFam Protein kinase superfamily protein 92 182 - -
Stsc60693g00007 216 SUPERFAMILY Protein kinase-like (PK-like) 13 201 IPR011009 -
Stsc60693g00007 216 Gene3D Transferase(Phosphotransferase) domain 1 6 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60693g00007 Stsc-Chr60693 56481 59627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60693g00007 23 206 Receptor kinase-like Gene Family AT3G19300 35.683 1.93e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Stsc60693g00007 PK_Tyr_Ser-Thr 2.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60693g00007 - - gmx:100791979 287.345