Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60692g00010 ATGGCTGCAGAACTGTTGGGAGGAGCTGCCATTGGAGCTGTCTTCGGAGAACTGCTGAAGGCGGTTCTGGAAGTTATGGACAAGGCCAGCAATTTCAAGAATACCTTGGCATACCTCCGAAACATTTTGGTGAAGATAGATCCTCTGATCAAGGAGATGGAGCAACAGAACGGTGAATTAGGGCGTTCGAAGGAAGAGCTGGGTTGGCTGATTGAAGAGATGAAAGAAGGGAGAAAGCTTGTTTACAAGTGTTGTAAGATCCACAGGCTCAATTTCCTTGGCAGGATTCAGAATCAAGATGAACTTGCCAAATTGGCGGTGTCTTTAGAAGGGTTCTTCAGGTTTGATGTGCCAGCTCAGACTTCAAGAGATACCAAAGAGACCTTGTTCAAAGTCACAAGGATACTTAGTGCTGATACAAAGATTCCTTTAGTTGGAACTCAAAGTGAAAATGCTTCTGCTTCTGATTCTGATTTTGACTCTTTGCCTCTGGAACTGCAGCATATTGATGAAATTGAGAGCCTTGCTATGCCTGTCTTGGAAGACATTGCCACCCTTGTGCACAAGAGTAGCCAAGCAGAGGCAAAAGTACATAAAGGGTATCAAAATCTACATAACAAGCATGAAGCAAGTGGGAGGCTGAGGAGCAGCATTCAGTTTTTTGGCAGTAAAATGGGATTTATAGTTAGTGATGAAATTAATTTGATTGCTGAAGATATTTCTAAACTAGAAGATGAGTTTAAGCTGATATTATCATTTTTCAGCAAGCCTGTGGAATCTAAGCACCTCTTTGATTGCCTTACAAACTCAATGCGACCTTCGTCCGGATCTACTGGCCATGAGGGTGATCCTAGTGGAGAGGCACCTTCTTCCTCTTCTCATCATTCTGAATCCACTCCTCTCAATCTTATACCATCAAGAATTGTCGATGTCCGTTCTAATTGGTTGGAAGAAAGCATCCAAAGATTTGGGGTTGAGAAACTCAACAATGATGATGCTCAAAAGTTGCAGTGGGAGTTATTGGAAGCCAAAATTGGAAGCTGGATCCATTTAATGCCTATAGCCGCCAAGTTGTTTGCTAGTGAGAGGGAAGTTTGTAATCTGATATTTGAAGGCTTCGATTCGCTCGCCGAACATTGCTTTGCTGAGGTGACTACAAACAGTATCTACATGCTACTTAGTGTTGGAGAAGCAAATGCCAGAATCTTGAGCTCCCCGCGAAGCTTCCATCTACTGTTAGACATGTATGAAACAATGCTAGAGCTCCATTTAGAGATTAAAACACTTTTTAGAGGCAAATCTTGCACAGAAATAAGAGAAGCAGCAATTGGTTTTACAAAACAACTTGCACTAATGTCTAAAGAGGTCTTTGGAGATTTGGAAGAAGTAGTTGACAAAGATGCTATAGAGACTGCAGTAACAGATGGAATCCATCCATTAACAAGCAATATACTAAATTTTGTGAGGGTTTTATACGACTACGAGTCGACGTTGAAGCAACTGTTCCAAGAATTTGAAGGTGGAGACTATTCTTCACAGCAGGCATCTGTAACAAAGCGAGCAATTCAGGCTTTGAAATCCAAATTAAAGTTGAAATCAGAGCAGTATAGAGACCCTGTATTTAAGCATATTTTTCTCATGAACAATATTTATCATATTGTTCAATTTGATTTATTTAGCTCCCAGTTCAAATGTATTCTCTGCTGGTTCCATGTTCTGATCCTCTCATGTTTTAGCTCTGAAGCCAAGGATATATTAGGGGATGATTGGGTACTAGATCATAGTGCAATTGTGCAGCGCCATTCAAATGAATACATAAGAAATGCTTGGGCTAAGACTCTGAAATGCATATCTGCAGAAGGCATATATAAAGAAAGTGGTGTTTTTTTCATGAACAGTGGTGTTAGCAGAGCAATTCTTAAAGACAGTTTGAAGACATTCAATGATATGTTTGAGGAACTCCATTGGAAACAATGTGAATGGAGTGTTCCTGACTGGGAGTTGCGGGAGTCTCTACAGGTTGCGGTTATTATAATGGTGTTACCCGCATATAAATCATTTAGGGAACGATTCAGTCCTCTTGTGGAAAGTGGAAAGAGTATTGAGAAGTACATCAAATACACGACTGAAGATTTAAAGAGAATGTTGGGCGAATTCTTCCAAGGGAACAACATCAGCCACACCACACGCTGA 2193 0.4077 MAAELLGGAAIGAVFGELLKAVLEVMDKASNFKNTLAYLRNILVKIDPLIKEMEQQNGELGRSKEELGWLIEEMKEGRKLVYKCCKIHRLNFLGRIQNQDELAKLAVSLEGFFRFDVPAQTSRDTKETLFKVTRILSADTKIPLVGTQSENASASDSDFDSLPLELQHIDEIESLAMPVLEDIATLVHKSSQAEAKVHKGYQNLHNKHEASGRLRSSIQFFGSKMGFIVSDEINLIAEDISKLEDEFKLILSFFSKPVESKHLFDCLTNSMRPSSGSTGHEGDPSGEAPSSSSHHSESTPLNLIPSRIVDVRSNWLEESIQRFGVEKLNNDDAQKLQWELLEAKIGSWIHLMPIAAKLFASEREVCNLIFEGFDSLAEHCFAEVTTNSIYMLLSVGEANARILSSPRSFHLLLDMYETMLELHLEIKTLFRGKSCTEIREAAIGFTKQLALMSKEVFGDLEEVVDKDAIETAVTDGIHPLTSNILNFVRVLYDYESTLKQLFQEFEGGDYSSQQASVTKRAIQALKSKLKLKSEQYRDPVFKHIFLMNNIYHIVQFDLFSSQFKCILCWFHVLILSCFSSEAKDILGDDWVLDHSAIVQRHSNEYIRNAWAKTLKCISAEGIYKESGVFFMNSGVSRAILKDSLKTFNDMFEELHWKQCEWSVPDWELRESLQVAVIIMVLPAYKSFRERFSPLVESGKSIEKYIKYTTEDLKRMLGEFFQGNNISHTTR 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60692g00010 730 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Stsc60692g00010 730 Gene3D Exocyst complex component Exo70 183 730 - -
Stsc60692g00010 730 MobiDBLite consensus disorder prediction 273 300 - -
Stsc60692g00010 730 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 132 IPR008808 -
Stsc60692g00010 730 SUPERFAMILY Cullin repeat-like 188 720 IPR016159 -
Stsc60692g00010 730 Pfam Exo70 exocyst complex subunit 348 717 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc60692g00010 730 PANTHER EXOCYST COMPLEX PROTEIN EXO70 180 722 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60692g00010 Stsc-Chr60692 45556 50361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60692g00010 192 730 EXO70 exocyst subunit family AT5G03540 47.255 8.55e-168 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60692g00010 K07195 - adu:107466547 982.63