Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60692g00009 ATGTTTGAGGAACTCCATCGGAAACAATGTGAATGGAGAGTTCCTGACTGGGAGTTGCGGGAGTCTCTACAGCTTGCGGTTACTATAATCGTGTTACCTGCATACAGATCATTTGTTAAACGATTCGGGCCTCTTGTGGAAAGTGGAAAGAGTCGTGACAAGAAGTACATCAAATACACGATTGAAGATTTAGAGAGAATGTTGGGCGAATTCTTCCAAGGGAACAACTTCAACCAAATCACACGCTGA 249 0.4337 MFEELHRKQCEWRVPDWELRESLQLAVTIIVLPAYRSFVKRFGPLVESGKSRDKKYIKYTIEDLERMLGEFFQGNNFNQITR 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60692g00009 82 SUPERFAMILY Cullin repeat-like 1 72 IPR016159 -
Stsc60692g00009 82 Pfam Exo70 exocyst complex subunit 2 69 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc60692g00009 82 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 74 IPR004140 GO:0000145|GO:0006887
Stsc60692g00009 82 Gene3D Exocyst complex component Exo70 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60692g00009 Stsc-Chr60692 44212 44567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60692g00009 2 82 EXO70 exocyst subunit family AT5G03540 66.667 2.05e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60692g00009 K07195 - gmx:100813987 119.783