Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60692g00008 ATGGCCGCAGAAGCTGCTCTTGGAGAATTGCTTTCAGAGGTTGTGAAAGCTGTGAAGAAGGCCATCCATTTCAAGAATACCTTGGAATACCTGAGAAACGTTTTGGTGAGGATAGATCCTTTGATTAAGGAGATGCAGAAACAGAACGATGAGCTTGACCTACCAAAGGAAGAACTCAATTCGCTGATTGAAGAGATGAAACGTGGGACAAAGCTTGTTCAAAAGTGTTCCAAGGTGTACAGGTTGGATTACATTTCAAAGATATACTACGAAAGTGAACTCGCCAAATTGGTGGAGTCTCTGGAAAGTTTCTTCAAGTTCGATGTGGCAGCTCAGACTTCAAGAGATACCAAAGAGACATTGCTCAAAGTCACAAGGCTACTTAGTGCTGTTAGGAAGCATCCCTTTGCTACAAATTCTTTTTCTTCTTCTGGTTCTGATGACTCTAATTCTGTGCATCCGGAATCAGATAATAATGTTTGTGATGATGAAAATGAAAGGGAAGAAGCCGATGATGATGAATTGGTGGTGGAGACTCTTGCTATGCCTCTCTTGGATGATATTGCCACCCTTGTGCACAAGGGTACCCATGGAGAGGAGGTAGGGGCAGCAAAAGTACACAAAGGGTATCATCAAGACCTACATAACAAGCATGAAGAAAGTGGGAGGCTGAGGAGCAGCATTCAGTTTTTTGGCAGTAAATTGGGATTTACAGTTAGTGGTGATGAAACTAATTTGATTGCTGAAGATATTTCTAAACTAGAAGATGAGTTTAAGCTGATATTATCATTTGTCAGCAAGCCTGTAGAACCTAAGCACCTCTTTGATTGCCTTACAAACTCAATGCGACCTTCGTCGGGATGTCCTGGCCATGAGGGTGATCCTAGTGGAGAGTCCACTCCTCTCAATCCTATACCATCAAGAATTGTGTCACAGCTACATTACTTAACTCAGCAGCTGCTTGAAGCTGGTCAACAACAACAGTTACTGAATATCTATAGAGATGTCCGTTCTAATTGGTTGGAAGAAAGCATCCAAAAATTTGGGGTTGAGAAACTCAACAATGCTCAAAAGTTGGAGTGGGAGTTATTGGAAGCAAAGATTGGAAGCTGGATCCATTTAATGCCTATAGCCGCCAAGCTGTTTGCTACTGAGAAGGAAGTTTGTAATATGATATTTGAAGGCTTTGATTCGCTCGCTGAACAGTGCTTTGCTGAGGTGACTACAAACAGCATCTCCATGCTACTTAGTGTTGGAGAAGCAAATGCCAAAATCTTGAGATCGCCGCAAAGCTTCCATCTACTTTTAGACATGTATGAAACAATGCTAGACCTCCATTTAGAGATTGAAACACTTTTTAGAGGCAAAGCTTGCATAGAAATAAGAGAAGCAGCAATTGGTTTTACAAAACAACTTGCACTAATGTCCAAAGAGGTCTTTGTAGATTTGGAAGAATTAGTTGAAAAACATGCTATAGAGACTGCAGTAACAGATGGAATCCATCCTTTAACAAGCAATATACTTAACTTTGTGAGGGTTTTATACGAGTACGAGTCGACGTTGAAGCAACTGTTCCAAGAATTTGAAGGTGGAGACTATTCTTCACAGCAGGCATCTGTAACAAAGCGAGCAATTCAGGCTTTGCAATCCAAATTAGATTTGAAATCAGAGCAGTATAGAGACCCTGCATTTAAGCATATCTTTCTCATGAACAATATTTATCATATTGTTAAATTTGTTCAGAGGTATGAAGCCAAGGATATATTAGGGGATGATTGGGTAAGAGTATATAGTGGAATTGTGCAGCACCATGCAAATCAATACATAAGAAATGCTTGGGCTAAGACTCCGCAATGCCTATCTATATCTATAACACACTCTTTATGTGCAAAAGCTTCAAGGATCGAAATCTAG 1914 0.4039 MAAEAALGELLSEVVKAVKKAIHFKNTLEYLRNVLVRIDPLIKEMQKQNDELDLPKEELNSLIEEMKRGTKLVQKCSKVYRLDYISKIYYESELAKLVESLESFFKFDVAAQTSRDTKETLLKVTRLLSAVRKHPFATNSFSSSGSDDSNSVHPESDNNVCDDENEREEADDDELVVETLAMPLLDDIATLVHKGTHGEEVGAAKVHKGYHQDLHNKHEESGRLRSSIQFFGSKLGFTVSGDETNLIAEDISKLEDEFKLILSFVSKPVEPKHLFDCLTNSMRPSSGCPGHEGDPSGESTPLNPIPSRIVSQLHYLTQQLLEAGQQQQLLNIYRDVRSNWLEESIQKFGVEKLNNAQKLEWELLEAKIGSWIHLMPIAAKLFATEKEVCNMIFEGFDSLAEQCFAEVTTNSISMLLSVGEANAKILRSPQSFHLLLDMYETMLDLHLEIETLFRGKACIEIREAAIGFTKQLALMSKEVFVDLEELVEKHAIETAVTDGIHPLTSNILNFVRVLYEYESTLKQLFQEFEGGDYSSQQASVTKRAIQALQSKLDLKSEQYRDPAFKHIFLMNNIYHIVKFVQRYEAKDILGDDWVRVYSGIVQHHANQYIRNAWAKTPQCLSISITHSLCAKASRIEI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60692g00008 637 ProSiteProfiles RPW8 domain profile. 1 143 IPR008808 -
Stsc60692g00008 637 MobiDBLite consensus disorder prediction 139 156 - -
Stsc60692g00008 637 Pfam Exo70 exocyst complex subunit 371 627 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc60692g00008 637 Gene3D Exocyst complex component Exo70 198 635 - -
Stsc60692g00008 637 MobiDBLite consensus disorder prediction 139 173 - -
Stsc60692g00008 637 Gene3D - 5 112 IPR036537 GO:0007166
Stsc60692g00008 637 PANTHER EXOCYST COMPLEX PROTEIN EXO70 222 621 IPR004140 GO:0000145|GO:0006887
Stsc60692g00008 637 SUPERFAMILY Cullin repeat-like 244 627 IPR016159 -
Stsc60692g00008 637 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 125 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60692g00008 Stsc-Chr60692 35029 44152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60692g00008 205 621 EXO70 exocyst subunit family AT5G03540 50.866 5.33e-144 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60692g00008 K07195 - adu:107466547 858.211