Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60692g00007 ATGGGAATTGCAGTGGGAGGAGCTGATTTGCTGAGTGAGAAAGCATCCATGATGAGGGAGTCTCTTCAGAAGAGCCAGACCATCACTGACAACGTTGTTACCATCCTAGGTTCCTTTGACCACCGCCTCTCCGCCCTTGAAACCGCCATGCGCCCCACTCAGATTCGTACTCATTCTATTAGGAAAGCTCATGAGAATATTGATAAGACTTTGAAGGCTGCTGAGGGGATTTTGGCTCACTTTGATCAATACCGCCAGGCAGAGGCAAAAATACTTAAGGGGCCACATGAAGACTTGGAAAACTATCTTGATGCAATTGAAAAACTGAGAAGCAACATCCAGTTTTTTGGCAGTAAAAAGGGTTTTAAGAGTGGTGATGGTATTGTCTTTCATGCCAATAATTTGCTAGCTAAAGCCATTTCTAAGCTAGAAGATGAGTTTAAGCAGCTATTGTCATCTTACAGCAAACCCGTGGAACCTGAGCGCCTCTTTGATTGCCTTCCCAATTCTATGCGACCATCGTCAGGATCACCTAGCCAGGAGGGTGATCCTACTGCAAAGAATCCGTCTTCTAATCATCATTCTGACTCACACAACAACAATAATGCTGATGCTGTTGTATACACCCCTCCTGCTCTTATACCACCAAGAATTTTGCCACTTCTACATGATTTAGCGCAGCAAATGATTGAAGCTGGACACCGGCAACAGTTACTCAAAATATACAGAGATGCCCGTTCTAATGTGTTGGAAGAAAGCCTCCAAAAGCTTGGGGTTGAGAAACTCAACAAAGATGACGTTCAAAAACTGCAATGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATCCATTTCATGCGTATAGCTGTTAAATTGTTGTTTGCTGGCGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTTAGTGAACAGTGTTTTGCTGAAGTGACTACAAACAGCGTCACCATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAAAGATCCCCAGAAAAGTTATTTGTACTTTTGGACATGTATGAAATTATGCAAGAGCTTCATTCAGAGATTGAAACCCTTTTCAAAGGCAAAGCTTGCACCGAAATAAGAGAGGCTGCAATGAGTTTGACAAAACGACTTGCACAAACAGCCCAAGAGACATTTGGGGATTTTGAAGAAGCTGTTGAGAAAGATGCTACAAAGACTGCAGTGACAGATGGAACTGTTCATCCTTTGACAAGCTATGTAATTAACTACGTCAAGTTTTTATTCGACTACCGGTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGGGGAGATGACTCTTCGCAATTAGCATCTGTAACAATGCGAATAATGCAAGCTTTGCAAACAAATTTAGATGGGAAATCAAAGCAGTATAGGGATCCTGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCCGATCAGTTCGGAGGTCCGAAGCCAAGGATTTGTTGGGAGATGATTGGGTACAACGACATAGGAGGATTGTTCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTCCAGTGCCTATCTATTCAGGGCCTTACCTCATCAGGAGGCGGAAGTAGTACTGCTGGCGGTGATGGTGCAGCCGGAAGTAGTAGCGGTGCTTCACGAGCACTTGTTAAGGACAGGTTCAAGACGTTTAACGTTATGTTCGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACCGAGTTGCGGGAATCTCTTAGGCTTGCAGTTGCTGAAGTCCTGTTACCCGCCTATAGATCATTTGTGAAACGATTCGGACCTCTGGTGGAAAGTGGGAAGACTCCTCAGAAGTACATCAAATACACAGCCGAAGATCTAGACCGGATGTTGGGAGAATTTTTCGAAGGGAAGAACATGAACGAAATGAAGCGGTAA 1968 0.4314 MGIAVGGADLLSEKASMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEGILAHFDQYRQAEAKILKGPHEDLENYLDAIEKLRSNIQFFGSKKGFKSGDGIVFHANNLLAKAISKLEDEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPSQEGDPTAKNPSSNHHSDSHNNNNADAVVYTPPALIPPRILPLLHDLAQQMIEAGHRQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVTMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACTEIREAAMSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGDDSSQLASVTMRIMQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSSTAGGDGAAGSSSGASRALVKDRFKTFNVMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKTPQKYIKYTAEDLDRMLGEFFEGKNMNEMKR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60692g00007 655 MobiDBLite consensus disorder prediction 170 206 - -
Stsc60692g00007 655 MobiDBLite consensus disorder prediction 162 206 - -
Stsc60692g00007 655 SUPERFAMILY Cullin repeat-like 77 646 IPR016159 -
Stsc60692g00007 655 Gene3D Exocyst complex component Exo70 76 655 - -
Stsc60692g00007 655 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 647 IPR004140 GO:0000145|GO:0006887
Stsc60692g00007 655 Pfam Exo70 exocyst complex subunit 281 642 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60692g00007 Stsc-Chr60692 23751 29216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60692g00007 9 655 EXO70 exocyst subunit family AT5G03540 75.074 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60692g00007 K07195 - gmx:100813987 1134.4