Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60690g00007 ATGTATAAGCCTTTCATGTCTTGTGATGATCCAAAAGGAGTTGTGGAGTGTGGGACAATTAGGAAATACAGGACCAATTCTCAGAAGATGAGTAAGGACAAGACAAAAGGCGGCTGTGGCGGTGGCCGGAGGCCAGCTGAGGACACCGGGGAATCATTGACAGTCAGAACAGACAAAGAAGATAAGGTCTCAAAAGGATCCTCCATAGAGAGAACTTTTGATTCTTCATCCTTGCAGCTCATGGAGGTATCAAGGGGAGCTCAAAGGCTCAACAACATGATTGATTCATGGTCTAGAGGCCTAAATTATGGTGGAAGGTCTGAAGATATTGCTAAAGATTTGTTGAAAGGTGCTCTTGATCTTCAAGAGTCTCTGGTAATGCTTAGGAAGGTGCAAGAAGCTTCGCGAGATGTGGCTCTGTCAAGGCGAAAACAGGGCGAGAAACCTGAGGAAGAGAGGATTATTGATGAGAGAGCACATTCCAATAGATTCAGTGAAGAAAGAAATTCAATGGGGTTTCAAAGACCTTGGCCTAGTGCTGATGGCTATTCAAGTAGCAGCAGAGAGGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTAGGCGAAATCTGTTTCCAGGAATAAGCACTGAAGCGCTGGATTCGGCATCAGAATTGCATTCAACAAGCTCAAGCCAATCATCTTCCATGTTTCAGAATGAGAGGCTTTCTGATTCTTCATTCTCCCCAATGAATGGAAGGAAGGAAAAAGGGCCGAGCCTCGTCGCGAGGCTGATGGGTTTAGAAGAAAAAGAAGAAGAAGAAGAAGTAACCTCAAGATCATTTCCAACTCTGATGCAAAAACAATTGGAGAGTGAAAAGATTGTGAATCAGAAGAGGCCTATGTTTGAGCTAGATATGCCTAAGGGAAGAAAGAATGATCCAATTGTTCATCCAGAAAGACACAAGAGTAAGACTCTGAGGGAAATTCTTGAGACTAATCACTTCAATGGAGTTCTAAAGAGTCCTGCAAGAGAGAGCAAGCATCAAGTGCCTCATTACAAGCAATTTGATGATTTGCCCCCCATTGTGCTTATCAAACCTCGATGTACTCCTTGTCGCGAGTTTGCCAGAGTCCATGAGCCGGTTCCTTCGGAAGAGTTATCCCTCAGAAAACTAAAAGCAAAACTAGTCTCTTCTGGAACATTCAAGCAAAGAGAAGGCTCAAATGCCAACATGGGAAAGGAAATGGAAGAAGATGTGTCTAAAAGGCTATTCAAGAGAGAAAGAACCGAGCTACTCATCAGAGAGGTTGTGGAGCCGGAAGCGAAAGAGATCAAGCCTATCGAAAATGAGAAGGTTCCAAGAGGAAAGGTGAAAGTGAATGGTAATGCTAATCACAAATCACAGGAAAGTGAAACAGTTGATAGAAAAGTTCAGCAGAAGAGTTCTAGCAAAAAGGCACCGGAAAAGGTGATTCTGAAACATAAAGTTGTGACGAAATCTCAGGATCAAGGAGGAGAAATCAGCTCCACAAAGTTGAGGAAGCCACAAAGTGGATCCAGAATTGACATGAATGAAATTCCTGGCAAAAAGAGTGCTGCTTTGAACTCCATCTCCAAAACAAGGAATCAGAAAATTAATAGTTCCAAGGAACAGATAAAGAATCAGATGAAGAAGCAAAGGTCTGTTGCTGAGCCTGAAGCAGCTAAACCTGTAGATGAACAACTAAGACATAAAGAAGAAGAAGAAAAGACCATTGATGTGCATTATAAAGATGACTGCACCGAGGTTAGAATCATCGATGTCATAGCAGAAGATCTTGCTGTAGAACATGAAGTATGTGCATCTGCAAATAAGATTACAGAAGATTGTAATCAGAGCCAGCTAAAGTCTGAACATGAAAATGGCAATGAAGATGATAGCAACAAGCATGGCAACAAAGAAGAAGCTGAGCTGAGATATTTGCTTCTAAACAATCAATCATTCATTAACCATGCAGAGGAACTCCTCAATCTTGATCCGGATAGTCCTAAGATTCTACCTAAACTCGAAATCGAAACGGATAGAGTAGCCAATCCTAAACTCTACTTGGATTGCGCGAATGAACTCGCGGAGCGCAAAAGCCTTCAAGAGTCACAAGTAGTCCACCCATTGTTGCTGCTGAACTCTTCAGGGAACTCAAGATTTCACATCTCTTTAGGAAGGTTGGTTGGGGAAATCTGCATAGCCATTCAGAATCTGTCATCATACAGTGAAATTCAATCTGGGAAGAAACTTGGTTCAGATAATATCTATGCAATGATGGAAAGAGATATAAATTGCAATTATGGAATGATGAATGGGATATGGAACTGGGGTTGGAGGCATGGGTTTTCTGCAGATGAAGCTGAACAAGTTGTGAGTGAAGTAGAGAGGCTAGTATTAAGTGGATTAATTGAGGAGGTACTTGTAAATTTATGA 2442 0.4181 MYKPFMSCDDPKGVVECGTIRKYRTNSQKMSKDKTKGGCGGGRRPAEDTGESLTVRTDKEDKVSKGSSIERTFDSSSLQLMEVSRGAQRLNNMIDSWSRGLNYGGRSEDIAKDLLKGALDLQESLVMLRKVQEASRDVALSRRKQGEKPEEERIIDERAHSNRFSEERNSMGFQRPWPSADGYSSSSREELKKVIKESLVRRNLFPGISTEALDSASELHSTSSSQSSSMFQNERLSDSSFSPMNGRKEKGPSLVARLMGLEEKEEEEEVTSRSFPTLMQKQLESEKIVNQKRPMFELDMPKGRKNDPIVHPERHKSKTLREILETNHFNGVLKSPARESKHQVPHYKQFDDLPPIVLIKPRCTPCREFARVHEPVPSEELSLRKLKAKLVSSGTFKQREGSNANMGKEMEEDVSKRLFKRERTELLIREVVEPEAKEIKPIENEKVPRGKVKVNGNANHKSQESETVDRKVQQKSSSKKAPEKVILKHKVVTKSQDQGGEISSTKLRKPQSGSRIDMNEIPGKKSAALNSISKTRNQKINSSKEQIKNQMKKQRSVAEPEAAKPVDEQLRHKEEEEKTIDVHYKDDCTEVRIIDVIAEDLAVEHEVCASANKITEDCNQSQLKSEHENGNEDDSNKHGNKEEAELRYLLLNNQSFINHAEELLNLDPDSPKILPKLEIETDRVANPKLYLDCANELAERKSLQESQVVHPLLLLNSSGNSRFHISLGRLVGEICIAIQNLSSYSEIQSGKKLGSDNIYAMMERDINCNYGMMNGIWNWGWRHGFSADEAEQVVSEVERLVLSGLIEEVLVNL 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 140 165 - -
Stsc60690g00007 813 PANTHER OS01G0228800 PROTEIN-RELATED 2 813 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 49 68 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 216 246 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 620 639 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 26 70 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 496 512 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 546 569 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 463 495 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 140 186 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 526 545 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 26 41 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 216 250 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 442 569 - -
Stsc60690g00007 813 MobiDBLite consensus disorder prediction 619 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60690g00007 Stsc-Chr60690 53987 56743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60690g00007 646 810 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 28.994 1.93e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60690g00007 - - gmx:100797863 906.36