Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60687g00009 ATGGGGTTCTTGGTGACGACGTTGATCTTCTTGGTGGTTGGAGTCATTGCGTGCCTTTGCACCCGAATTTGCTGCAACCGAGGACCCTCCACTAATCTATTTCACCTTACTTTGGTTACTACTGCCACAATATGCTGCTGGATGATGTGGGCAATCGTATATCTGGCACAGATGAACCCTCTCATAGTACCTGTGCTGAATGAGGGTGAATAA 213 0.4742 MGFLVTTLIFLVVGVIACLCTRICCNRGPSTNLFHLTLVTTATICCWMMWAIVYLAQMNPLIVPVLNEGE 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60687g00009 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Stsc60687g00009 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 69 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60687g00009 Stsc-Chr60687 27698 29178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60687g00009 1 70 Primary Pumps ATPases(2) AT5G55290 82.857 8.12e-40 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60687g00009 K02153 - dcr:108225318 144.05