Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60687g00006 ATGGCATCTTATTCAGAATCATGGATGAAGGAATACAATGAAGCAGTGAAACTTTGTGATGATATTACTGCCATGATGTCTGGCCGGAACTCGGTTTCTTCCGGGCCGGAAACCCAGCGTCACACATCTTCTATAAGAAGGAAGATTACAATATTGGGGACCAGACTTGATAGCTTGCAATCACTTTTGTCTAAGCTTCCTGCAAAACAAGCTATATCTGAGAAGGAGATGAATCGCCGCAAGGACATGCTTGCAAATTTGAGATCTAAAGTTAACCAAATGGCTTCCACTTTGAACATGTCAAACTTTGAAAATAGGGATCGTTTGCTTGGGACTGAAACAAAGCCAGATGACATGAGCAGAACAACTGGCCTGGACAACAACCAACTTGTTGGACTTCAACGGCAAATTATGAAAGGTCCCTTGATTTTAGTTGCTTGCTTTAGAACATATTGCTTATAG 462 0.4134 MASYSESWMKEYNEAVKLCDDITAMMSGRNSVSSGPETQRHTSSIRRKITILGTRLDSLQSLLSKLPAKQAISEKEMNRRKDMLANLRSKVNQMASTLNMSNFENRDRLLGTETKPDDMSRTTGLDNNQLVGLQRQIMKGPLILVACFRTYCL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60687g00006 153 Gene3D - 4 102 - -
Stsc60687g00006 153 SUPERFAMILY t-snare proteins 30 99 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60687g00006 Stsc-Chr60687 21497 23704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60687g00006 1 139 SNARE and Associated Proteins AT1G79590 65.957 4.42e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60687g00006 K08503 - gmx:100782666 212.616