Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60687g00005 ATGGCATCTTATTCAGAATCATGGATGAAGGAATACAATGAAGCAGTGAAACTTTGTGATGATATTACTGCCATGATGTCTGGCCGGAACTCGGTTTCTTCCGGGCCGGAAACCCAGCGTCACACATCTTCTATAAGAAGGAAGATTACAATATTGGGGACCAGACTTGATAGCTTGCAATCACTTTTGTCTAAGCTTCCTGCAAAACAAGCTATATCTGAGAAGGAGATGAATCGCCGCAAGGACATGCTTGCAAATTTGAGATCTAAAGTTAACCAAATGGCTTCCACTTTGAACATGTCAAACTTTGAAAATAGGGATCGTTTGCTTGGGACTGAAACAAAGCCAGATGACATGAGCAGAACAACTGGCCTGGACAACAACCAACTTGTTGGACTTCAACGGCAAATTATGAAAGAACAAGACAATGGCCTTGCAAAATTGGAGGATACTATACTAAGCACAAAACATATTGCACTTGCTGTCAATGACGAGTTGGATCTACACACTAGACTTATTGATGACTTGGACCAACAAGTAGACGTTACAAATTCTCGGATGAGGTGGGTGCATAAGAAATTGACAGTTCTAAATAAACGAACCAAGGGTGGTTGCTCCTGCTGGTGCTTGCTTTTATCAGTGGTTGGCATTGTGGGTTTGCTTCTTGTCATTTGGATTTTACTCAATTATTTGTAA 696 0.4109 MASYSESWMKEYNEAVKLCDDITAMMSGRNSVSSGPETQRHTSSIRRKITILGTRLDSLQSLLSKLPAKQAISEKEMNRRKDMLANLRSKVNQMASTLNMSNFENRDRLLGTETKPDDMSRTTGLDNNQLVGLQRQIMKEQDNGLAKLEDTILSTKHIALAVNDELDLHTRLIDDLDQQVDVTNSRMRWVHKKLTVLNKRTKGGCSCWCLLLSVVGIVGLLLVIWILLNYL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60687g00005 231 Pfam SNARE domain 172 223 IPR000727 -
Stsc60687g00005 231 SUPERFAMILY t-snare proteins 30 99 IPR010989 GO:0016020|GO:0016192
Stsc60687g00005 231 PANTHER SYNTAXIN 39 215 IPR045242 -
Stsc60687g00005 231 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
Stsc60687g00005 231 Gene3D - 137 199 - -
Stsc60687g00005 231 CDD SNARE_Qc 138 194 - -
Stsc60687g00005 231 SUPERFAMILY SNARE fusion complex 126 196 - -
Stsc60687g00005 231 FunFam syntaxin-51 isoform X2 137 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60687g00005 Stsc-Chr60687 21497 23705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60687g00005 1 231 SNARE and Associated Proteins AT1G79590 66.524 6.20e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60687g00005 K08503 - gmx:100782666 323.939