Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60683g00002 ATGGAGAAATCTCGCAACCGCCGGTCCTCCGTTGCTTCCAGGAACCAACCGCACACAGCTGTTCTTCCTCAAGAGAGTAAACAAGTTCATAGGCAGCGACAACTTCCCGATTTATCTCCTGATTCTGTTTCTTGCGGTGGTGGGGTTGCAGACAAAGATTCCTTCTCCTTCAAATTTGGGTGGAGATCTTCAAAACAACTGTTCGGAACTCCAATTAAGAAATTACTAGCCGATGAGATGTTGCAGGAAACCGAGTCTAAAAGAAGAAATCCTGGTGTTATTGCCCGATTGATGGGTCTGGATGGCCTGCCTGCTAACAAGCAGCAAAAGGGTTCATCAGAGAATCATGTAGAGAAAGCGCGAAGCAGAGGAACATCATACGATGGTCGGTCCTCTAGGAGGAGCTCAAAGGATCAACAAGAATTTAAGGATGTGTTTGAGGTCTCAGAGATCCCAATGGTAGAGAGCAGCAGGTATTCATCACGCGTGTCCGCGGAAGACATGAGGAATGCTGATGATGAGATGTCATTCATTGAGCAGAAGTTTATGGATGCCAAACGCCTTGCAACTTACCAGGATTTACAGTCTTCAAAGGATTTCCATGATACACTTGAGGTACTTGACTCTAACAAGGAACTTCTTCTGAAGTACTTTAAACGGCCAGATTCTTTGTTTAAAAAGCATCTAAACGATCTTCAAGCTGCTCCTTTCGAATCACATTTGGGTGACACAGAAGCTATGCAATTACCTGAGATTGAGAAGTATGGAAATGAGTTTGACTGGAGGTTAGACACCAACACAGCATGGGTGAATTGTGATAGATCTCATCAAAGGCAGCATGATGGATATCCTCGCCAATTCGACAGAAGACATGTGATGCATAGTTCACCGCGATCATCAAAGCTTCCGTCAAAGGGAAAACATGAACAAGGTGCTGCCCCTACAAAGATTGTTGTCCTAAAGCCTAATCTTGGGAAATTCCAGAATGCTGCCAGAAATGTTTCTTCACCTTGTTCTCCCCATATTTTTCAGTCAGAGCATGCAAATGATACGGAATTTTCAGATATCCGATTTAGGGACTCCAACATGAATCATCAGCAAAAGATTAATTTGCCTGATACTGCCAGGCCTTTGAGGCATAACTCTTTGGAATCCAGAGAAATTGCTAAAGAAATAACTCGTCAAATGAAAAGTAGTTTGAACAATGGTGGTTGCGTGATGTCACCCTCTTATAGAATTAGAGGATATGCTGGGGATGATAGTTCTTGCAGTGCCTCTGGAAATGAATCCACAGAGGAATCAGTGGGAACTCCTGCTACATGGGGAAACTCTTCTGACCTTAATAATTGTAGCAGGAGGTCATCGCATTCTAGTGAATCATCTGTGAGTAGGGAGGCAAAGAAGAGATTATCAGAAAGGTGGAAAATGGCACACAAGTCTCAGGAGATGCCAATTATCAGCAAGAGCAGCACACTTGCTGAAATGCTTGCTATCACTGATAAGGATGTGAAGACCACAAATTTTGATGGAAGGTCTACTGTGGAACCACAACGTAATAGACCTGGTGGGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGATGTATTGGGAGTTTGCCAAGGTCAAGATCTCTACCTGCTTCTTCTAATGTCTTTGGAAGTCCTAGAACAATCACACGAAATGAAGCACTCTGTGATGATCGATTTAGAATGCCAAAGGAAGCCATTAAACGGGATAGGAGAAGTGGAAGGAGCCACGATCAGAGGCATGGTGTGAATAGTAGAAGCACAAGATCTGGTCACAAGAAATCTTGGTCTTTGCATTTGTCCGAGTTGGAAGGTAATGATTTTTCACCAAGCTTTAGTACCATTCAGAATAAAATGGAAACAAATGTTGAAGAAGGTTCATCAAAACTAGAGGTTCCTGTCACCGAATCCCTTTCTGCGACCCTCGAGGATACAAGTGCAATTCCTGATACTTTTGTGACTGTGGCAAATGAAGATGCAGACAGCTCTTGTGAACCTTCTGATAAAGTGCTGCCTGAATCATCTTCTGTTTTGATCAAAGTTGATAACACTGCTGCTGACAAAGACAATTCAATTCAGCAGGAACTATCTGCTGGGTCTCCTGATGGAAGTTCAGACTGCTTTCAACCACCTGTTCCTCGACTTGAATCTTCATGTGGTAAAGATACTGATCAACCCAGTCCTGTCTCAGTTCTGGAACCTTCTTTTACGGATGATCTATCATCATCATGTTCTGAGTGTTTTGAAAGTCTCAGTGCTGACTTACAAGGGCTCCGAATGCAGCTCCAGTTGCTGAAGTTGGAATCTGAAGGATATGCCGAGGGATCTGTGCTAATTTCAAGCGATGAAGAGTGTGGGGAAGGTTCTACTAGATTGTCTTCTAAAGACAATCGATTACGTAGAACCGAAGATAGCTGGGAGTCTTCCTACATTATTGATGTGCTGTCTGAATCTGGCATTGATGGAGGTCAACCTGATCCGAATTTTGAATTTTGGCATTCTCTGGAATGCCCTGTAAGTCTCTCAGTGTTTGATGAACTTGAAAAGAGGTACTGTGATTGGACCACTTGTTCAAGGTCTGAAAGACGCATGCTTTTTGACCGTATAAATTCTGGAATTGCCAAGATCCACAATCAATCCATGAACTCACAGCCATGGCTGAGCCAGGCAACAACAAATGTGGGTTTTAAACTGATTGAAAATCGGATCCAAGATGGTCTTCTCAGGATGCTGGGAAGCCAGGGAAAAGTGAAGGATGATGCTTTGGGGAAGGTGTTGGTTAAGGAATCACAGTGGTTAGACTTAGGAGATGAAATTGATGTAATAGGTAGGGAAATTGAGAAATTGTTGTTAGAAGAAATAGTAGCTGAGATAGCTGGTGCATAG 2928 0.4331 MEKSRNRRSSVASRNQPHTAVLPQESKQVHRQRQLPDLSPDSVSCGGGVADKDSFSFKFGWRSSKQLFGTPIKKLLADEMLQETESKRRNPGVIARLMGLDGLPANKQQKGSSENHVEKARSRGTSYDGRSSRRSSKDQQEFKDVFEVSEIPMVESSRYSSRVSAEDMRNADDEMSFIEQKFMDAKRLATYQDLQSSKDFHDTLEVLDSNKELLLKYFKRPDSLFKKHLNDLQAAPFESHLGDTEAMQLPEIEKYGNEFDWRLDTNTAWVNCDRSHQRQHDGYPRQFDRRHVMHSSPRSSKLPSKGKHEQGAAPTKIVVLKPNLGKFQNAARNVSSPCSPHIFQSEHANDTEFSDIRFRDSNMNHQQKINLPDTARPLRHNSLESREIAKEITRQMKSSLNNGGCVMSPSYRIRGYAGDDSSCSASGNESTEESVGTPATWGNSSDLNNCSRRSSHSSESSVSREAKKRLSERWKMAHKSQEMPIISKSSTLAEMLAITDKDVKTTNFDGRSTVEPQRNRPGGWVEPLGISSRDGWKDGCIGSLPRSRSLPASSNVFGSPRTITRNEALCDDRFRMPKEAIKRDRRSGRSHDQRHGVNSRSTRSGHKKSWSLHLSELEGNDFSPSFSTIQNKMETNVEEGSSKLEVPVTESLSATLEDTSAIPDTFVTVANEDADSSCEPSDKVLPESSSVLIKVDNTAADKDNSIQQELSAGSPDGSSDCFQPPVPRLESSCGKDTDQPSPVSVLEPSFTDDLSSSCSECFESLSADLQGLRMQLQLLKLESEGYAEGSVLISSDEECGEGSTRLSSKDNRLRRTEDSWESSYIIDVLSESGIDGGQPDPNFEFWHSLECPVSLSVFDELEKRYCDWTTCSRSERRMLFDRINSGIAKIHNQSMNSQPWLSQATTNVGFKLIENRIQDGLLRMLGSQGKVKDDALGKVLVKESQWLDLGDEIDVIGREIEKLLLEEIVAEIAGA 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 458 476 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 1 47 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 10 39 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 579 610 - -
Stsc60683g00002 975 PANTHER AFADIN 27 973 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 275 312 - -
Stsc60683g00002 975 Pfam DUF761-associated sequence motif 84 107 IPR032795 -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 275 295 - -
Stsc60683g00002 975 Pfam Domain of unknown function (DUF4378) 822 971 IPR025486 -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 507 529 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 112 141 - -
Stsc60683g00002 975 Pfam Protein of unknown function (DUF3741) 179 223 IPR022212 -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 421 457 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 418 476 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 708 744 - -
Stsc60683g00002 975 Coils Coil 762 782 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 103 141 - -
Stsc60683g00002 975 MobiDBLite consensus disorder prediction 579 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60683g00002 Stsc-Chr60683 24812 29894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60683g00002 69 975 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 38.519 1.53e-140 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60683g00002 - - ccaj:109788117 1172.15