Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60679g00004 ATGCACTCCCACACCAAACTTGGGTCCATCACATGTAGAAAATGCATCACATTAATAATACCTTTAAAAAAATCCACTATCTTGGGAGCCGCACTCTCCACTCCGCCGCTGTATCCACTGTCATCGACCTCATTTGCCCCTAAGGATCCAATTGATACTCGGCCGGAGAGGCCAGTCCGAAAAATATGCACCGAACAATTGTTCTCCGCCAAAGTCCTTGACGCGAGTCAAGGCCTTCGGCAAAAGAAACTTCTAGATCTTCTCAACGATATGCGAAAATACACTCGAACAGGCAAAGCTATTAATGTAGGGCATGCTGCTTTTAGGGCGTGCATAAACTTTTTGTCCTATACTTTTGTATCCGAGGATTTTGTTGAGTCCGTAGAGAATGGAGAGTACAAAGACATTGTGTCCACTCTCTTGAAATTATCTGGAACAGCAAATGTGGTTGATGTTTTTCCGGTGTTGAAGTTGTTTGATCCACAAGGACTTCAAAGGAACACCACTAATTACATTACCATGTTTTTCCATAGATTGGACAAGTTGATTGATAAAAGGTTGAAGCTAAGAGAAGAGGAGAATTATGTCACAAACAATGACATGTTGGACACACTTCTTGATATTTCTCATCAGGATAGCCAGAAGATGGATAGAGAAAAGATCAAACATTTTTTGCTGGGTCTACTTGTTGCTGGAACAGACACCACTGCATTTGGATTAGAAAGAGCAATGACTGAATTACTTCATAACCCAAAAGTCATGTCAAAAGCCAAACAAGAATTAGAACAAATCATTGGAAAAGGTAACCCTATTGAGGAATCCGATGTTGTTAAACTTCCATACTTACAAGCCATAATCAAAGAAACACTAAGATTGCATCCACCGGCTCCACTTTTACTCCCAAGAAAAGCAAAAATTGATGTCGAAATTTCAGGCTACACAATCCCAAAGGGTGCAAGAGTTCTAATAAATGCATGGGCTATGGGTAGAAACCCTAATATATGGGAAGATGCACATTTATTTTTACCGGAGAGGTTTTTGGGATCTAATATTGATGTTAAAGGAAGAGATTTTGAGCTCACACCGTTTGGTAGTGGAAGAAGGATTTGTCCAGGTTCACCACTTGCTATTAGAATGATGCATGTGATGTTGGGATCATTGGTCAATTCTTTTGATTGGAAACTCGAAAATAATATCAAGCATGATGATATGGACTTGGATCAACCCCTCCGAGCTATTCCTGTTGAACTGAAAAGTTGTCTTGTTTAA 1269 0.3995 MHSHTKLGSITCRKCITLIIPLKKSTILGAALSTPPLYPLSSTSFAPKDPIDTRPERPVRKICTEQLFSAKVLDASQGLRQKKLLDLLNDMRKYTRTGKAINVGHAAFRACINFLSYTFVSEDFVESVENGEYKDIVSTLLKLSGTANVVDVFPVLKLFDPQGLQRNTTNYITMFFHRLDKLIDKRLKLREEENYVTNNDMLDTLLDISHQDSQKMDREKIKHFLLGLLVAGTDTTAFGLERAMTELLHNPKVMSKAKQELEQIIGKGNPIEESDVVKLPYLQAIIKETLRLHPPAPLLLPRKAKIDVEISGYTIPKGARVLINAWAMGRNPNIWEDAHLFLPERFLGSNIDVKGRDFELTPFGSGRRICPGSPLAIRMMHVMLGSLVNSFDWKLENNIKHDDMDLDQPLRAIPVELKSCLV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60679g00004 422 Gene3D Cytochrome P450 41 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 FunFam Geraniol 8-hydroxylase 172 417 - -
Stsc60679g00004 422 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
Stsc60679g00004 422 Pfam Cytochrome P450 58 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS E-class P450 group I signature 220 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS E-class P450 group I signature 283 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS E-class P450 group I signature 240 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS E-class P450 group I signature 370 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS E-class P450 group I signature 324 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 SUPERFAMILY Cytochrome P450 57 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS P450 superfamily signature 284 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS P450 superfamily signature 231 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60679g00004 422 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 57 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60679g00004 Stsc-Chr60679 35018 39283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60679g00004 57 416 Cytochrome P450 AT2G45550 40.800 9.21e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60679g00004 - - aip:107612182 645.966