Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60678g00002 ATGGCATATGAAAAACCATTCCTTGACCTTAAGCTTAGTGTGGAAGATGTTATACTAGTAAAACCATCAAAACCAACTCCTTCATCTGTTGTTTCTCTATCCACAATTGATAACAGACCTGAACTTAATAGTCTATGTCAAACCATTCACATATTTAAACCATCAAATAACATTACTCTTATTGATGACCCTGCACTTGTGATCAAAGAGGCACTCTCCGAGGCTTTATTCTATTACTATCCTCTTGCTGGAAGGCTCGTAAAACATGCTGATGATGGGAAACTTAGAATCCATTGCAATGCATATGGAGTTCCATTTGTGGAAGCCATTGCAAATTGCAAGCTTTCTTGCCTTCACTACCTTGACGATAGTGACACTGAAAACGCAAAACACTTAGCATTTGATAATCCTTTTCATCAAGATGATCACAAAAATGGTTACCAATATCCTTTGGGGATAAAGGTGACCAAGTTTCTCTGTGGCGGGTTCACAGTTGGAATTGGCGCATCACATGCTGTTTTTGATGGATATGGAGGGTCTCAATTCTTTCAAGCCTTGGCTGAACTCGCAAGCGGAAAAAGCGAGCCATCCGTGAAGCCTGTGTGGGAGAGGGAAAGGCTAAATGGGTCAATTACTGAACATCCATTGCAAACTCCCATGGATGAAGCCTCGGCGGCGGTTTCACCTTATTTGCCCACCACAAAACTTGTGCATGGATGCTTTAAGGTGGATAGTGAGTGCATAAAAAGACTCAAAATTAGTTTAATAAAGGAAATCAATGATAGTAATAACATTATCAATGACATTGATCCTTTAAAGGGTGAAAGCTTTACAAGTTTTGAAGCCCTTGGTGCTTATGTTTGGAGGTCAAGAACTAGAGCCTTGAAACTCAACTCCGATGGAAAAACTTCATTGGCTATTGTTGTAGGGTTAAGAAGGAATCACTCGTTGGTTCCTCCTTTGCCTGAAGGGTATTATGGGAATGCATTTGTGGATCCCAAAGTTGTTCTATCAGTGAAGGAACTCAATGAAAAACCACTCTCTCATGTGGTGAAGATGATCAAGGAGACTAAGAAACTCGGTTTCTCAAGGGAGTATGTTATGAATGCTGTTGACACAAAGGAGACACAAACTGAACACTTTGATTATCAAGGTATTGGTGCATCTATGGTTCTATCTAATTGGATGCATTTGGGTATGTTGGAAAACATGGACATAGGATGCGCGAAGCCGGTGAACATGATACCGGCACCATGCGACATGTTTGGAACAGTTGGAGTGTGCATTTTCTCAGCTTCTAGTGACTTGGATCCTTCAATGAATGGAGGTGTTAGGATCTTTGTTTCTCTACCTAGTGATGCTATGTCCAAGTTCAAGGAGGAGATGGAACTTTTGCTTGTTAAACCATAG 1410 0.4078 MAYEKPFLDLKLSVEDVILVKPSKPTPSSVVSLSTIDNRPELNSLCQTIHIFKPSNNITLIDDPALVIKEALSEALFYYYPLAGRLVKHADDGKLRIHCNAYGVPFVEAIANCKLSCLHYLDDSDTENAKHLAFDNPFHQDDHKNGYQYPLGIKVTKFLCGGFTVGIGASHAVFDGYGGSQFFQALAELASGKSEPSVKPVWERERLNGSITEHPLQTPMDEASAAVSPYLPTTKLVHGCFKVDSECIKRLKISLIKEINDSNNIINDIDPLKGESFTSFEALGAYVWRSRTRALKLNSDGKTSLAIVVGLRRNHSLVPPLPEGYYGNAFVDPKVVLSVKELNEKPLSHVVKMIKETKKLGFSREYVMNAVDTKETQTEHFDYQGIGASMVLSNWMHLGMLENMDIGCAKPVNMIPAPCDMFGTVGVCIFSASSDLDPSMNGGVRIFVSLPSDAMSKFKEEMELLLVKP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60678g00002 469 Gene3D - 7 219 IPR023213 -
Stsc60678g00002 469 Pfam Transferase family 18 464 - -
Stsc60678g00002 469 Gene3D - 220 462 IPR023213 -
Stsc60678g00002 469 PANTHER ACYL TRANSFERASE 4 14 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60678g00002 Stsc-Chr60678 32186 33595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60678g00002 10 460 Monolignol Biosynthesis Gene Families AT5G48930 26.483 1.89e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60678g00002 K20240 - gmx:100801843 480.33